FC923134

Overview
NameFC923134
Unique NameFC923134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length747
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.003e-45
Identity = 92/194 (47.42%), Postives = 119/194 (61.34%), Query Frame = 2
Query:   74 LTMSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 649
            ++ +  Q I CKA V W    PL +E IQV PPK+ EVRVK+LY +VCHTD    +G  P  L+P VLGHEG G+VES G+ V     GD V+P Y+ +CKECE C +  TNLC K  I+  NG M D +SR +  G++L+H   CST+SEY V+    + KV+P       S L CG +TGYGA     KVE+
Sbjct:    1 MSSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEE 194          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.003e-45
Identity = 91/193 (47.15%), Postives = 131/193 (67.88%), Query Frame = 2
Query:   83 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSE-GFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM--LDSTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 649
            S+ + I CKA V    GEPL +EEI V PP+  EVR++++  ++CH+D+   +   P   +PR+LGHE +GVVES G+ VKEV EGD V+PT++ +C +C +C S  +NLC K+P  ++  M   D++SR + + G+ L+H  + S++SEY V+D   VVK+D SI PS A  LSCG +TG GAAW+ AKVEK
Sbjct:   12 SSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKVEK 204          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.417e-45
Identity = 94/202 (46.53%), Postives = 130/202 (64.36%), Query Frame = 2
Query:   83 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAP--LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLML-DSTSRMSV---------RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 649
            +  + ITCKA V WG   PL ++EI V+PP+  EVRVK+LY+S+CHTD+ C  G       +PR+LGHE VG+VES G+ VK+VKEGD VIPT+ GEC EC+ C  E +NLC +Y +  +  +M+ D  +R S          + Q +YH  + ST++EY V+D+  VVK+DP+      S LSCG +TG GAAW  A V++
Sbjct:    4 TQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVSTGVGAAWNIANVKE 205          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 4.463e-45
Identity = 91/188 (48.40%), Postives = 118/188 (62.77%), Query Frame = 2
Query:   89 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE 646
            +Q I CKA V W  G+PL +EEI+V PPK+ EVR+K+L  +VCHTD     G  P   +P +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR + +G+ ++H    ST+SEY V+    V K+DPS        L CG +TGYGAA   AKVE
Sbjct:    3 NQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVE 190          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.444e-44
Identity = 89/188 (47.34%), Postives = 117/188 (62.23%), Query Frame = 2
Query:   89 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE 646
            +Q I CKA V W  G+PL +EEI+V PP++ EVR+K++  +VCHTD     G  P   +P +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR + +G+ + H    ST+SEY V+    V K+DPS        L CG +TGYGAA   AKVE
Sbjct:    3 NQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVE 190          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.444e-44
Identity = 85/193 (44.04%), Postives = 120/193 (62.18%), Query Frame = 2
Query:   77 TMSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 649
            T +  + I C A + W   +PL +EE++V PPKS EVR+K+L++ VCHTD    EG  P  ++P +LGHEG G+VES G+ V  VK GD VIP Y+ +C EC+ C +  TNLC K  +    G+M D T+R + +G++++H   CST+SE+ V+    + KV+P         L CG +TGYGAA   A VEK
Sbjct:    1 TDATGKPIKCMAAIAWEAKKPLSIEEVEVAPPKSGEVRIKILHSGVCHTDAYTLEGIDPEGIFPVILGHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGVMPDGTTRFTCKGKEVFHFMGCSTFSEFTVVAEISIAKVNPKAALDKVCLLGCGISTGYGAALNTAAVEK 193          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.417e-44
Identity = 89/188 (47.34%), Postives = 116/188 (61.70%), Query Frame = 2
Query:   89 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE 646
            +Q I CKA V W  G+PL +EE++V PPK+ EVR+K++  +VCHTD     G  P   YP +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR + +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGAA   AKVE
Sbjct:    3 NQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVE 190          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 1.436e-43
Identity = 89/188 (47.34%), Postives = 115/188 (61.17%), Query Frame = 2
Query:   89 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE 646
            ++ I CKA V W  G+PL +EEI+V PPK+ EVR+K+   +VCHTD     G  P   +P +LGHEG G+VES G+ V  +K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR + +G+ + H    ST+SEY V+    V K+DPS        L CG +TGYGAA   AKVE
Sbjct:    3 NKVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTNLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVE 190          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.198e-43
Identity = 82/189 (43.39%), Postives = 122/189 (64.55%), Query Frame = 2
Query:   92 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC--LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 649
            + I CKA V W  G+PL +EE++V PP++ EVRVK+LY ++CHTD+   E     P++PR+LGHE  G+VES G+ V E+  GD V+P + GECKEC++C SE +N+C  L+  +    ++ D  SR +++G+ ++H    ST+SEY VI    + K++P         LSCGF+TG+GA    AK +K
Sbjct:    6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKK 194          
BLAST of FC923134 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.198e-43
Identity = 82/189 (43.39%), Postives = 122/189 (64.55%), Query Frame = 2
Query:   92 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC--LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 649
            + I CKA V W  G+PL +EE++V PP++ EVRVK+LY ++CHTD+   E     P++PR+LGHE  G+VES G+ V E+  GD V+P + GECKEC++C SE +N+C  L+  +    ++ D  SR +++G+ ++H    ST+SEY VI    + K++P         LSCGF+TG+GA    AK +K
Sbjct:    6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKK 194          
The following BLAST results are available for this feature:
BLAST of FC923134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
ADHX_CAEEL2.003e-4547.42Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHL7_ARATH2.003e-4547.15Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADHL3_ARATH3.417e-4546.53Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_MOUSE4.463e-4548.40Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_RAT6.444e-4447.34Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_OCTVU6.444e-4444.04Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADHX_BOVIN8.417e-4447.34Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_RABIT1.436e-4347.34Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADH2_ORYSJ3.198e-4343.39Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI3.198e-4343.39Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionC31701D12EF StrClemenN Citrus clementina cDNA clone C31701D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923134 ID=FC923134; Name=FC923134; organism=Citrus clementina; type=EST; length=747bp
GGAAGTGGCCTTATGCAGAGCTCATCTCCTTATCGACAGTTTGAAATTCG
AGGCTGCAAAATCTACAGCAATACTAACAATGAGCAATTCACAAGCCATA
ACGTGCAAAGCTGTGGTATGTTGGGGTTTAGGAGAGCCATTAAAGGTAGA
GGAGATACAAGTAGAGCCTCCGAAATCAACTGAAGTTAGGGTTAAGATGC
TTTATGCCAGTGTTTGTCACACTGATATCCTTTGCTCTGAAGGATTCCCA
GCGCCTCTTTATCCTCGTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGA
GAGTGCTGGGGATGAAGTGAAAGAAGTGAAAGAAGGAGATATTGTGATTC
CAACTTATATTGGAGAATGTAAAGAATGTGAAAATTGCACATCAGAAATG
ACCAATTTATGCCTAAAATATCCAATAGCACTGAACGGTTTAATGCTTGA
TAGCACTTCAAGAATGTCCGTAAGAGGCCAAAAATTGTATCACATTTTTT
CATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAATTATGTAGTC
AAAGTTGATCCAAGCATTGATCCCTCGGATGCTAGCTTCCTTTCATGTGG
ATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAG
GATCTAGTGTTGCTGTTTTAGGGCTTGGTACTGTTGGATTAGGGGCTGTT
GATGGAGCAGGATGCAGGGGCAGCTAGATAATGGGATAGACAGACCC
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