FC923162

Overview
NameFC923162
Unique NameFC923162
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.240e-74
Identity = 132/202 (65.35%), Postives = 159/202 (78.71%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 681
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRP WYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNL 210          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.240e-74
Identity = 132/202 (65.35%), Postives = 159/202 (78.71%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 681
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRP WYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNL 210          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.750e-67
Identity = 123/201 (61.19%), Postives = 153/201 (76.12%), Query Frame = 1
Query:   85 TTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 681
            ++ +E LP  L S +E P LFDGT RLYI Y CPFAQRAWI RN+KGLQDKI+LV ++L+D+P WYKEKVY    VP+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+FADEL ++ + FT  +Y+    K D + +   A D +E AL KF DGPFFLGQFS VDIAY+  +ER QI+ S   KY+IT GRP L
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNL 209          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.211e-62
Identity = 114/202 (56.44%), Postives = 148/202 (73.27%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 681
            +++ +E+LPP L S ++ PP+FDGT RLYI Y CPFAQRAW+TRN KGLQDK++LV ++L+D+P WYK+KVY    VP+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D  KR+FADELF+  + FT  +Y+      A   +   A D LE  L KFDDGPFFLGQFS  D+AY+  +ER QI+ S    YDI  GRP L
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNL 209          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 57/192 (29.69%), Postives = 93/192 (48.44%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTND-VYTSFKGDPA---KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAW 690
            P+ +G+ R+Y    CPFA+R  +    KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   ELFS + +     + +  K D A   ++    F  LE+ L       F     S +D    P+ ER +     E         PKL  W
Sbjct:   18 PVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEV--ININLKNKPEWFFKK-NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNE----CVDHTPKLKLW 202          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG----PFFLG--QFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAW 690
            P+ +G  R+Y    CPFAQR  +    KG++ ++  + +NL+++P W+ EK  P+  VP LE++ G ++ ES+   +Y+D  +    L PDDP K+   K   E FS +      +  SF     K+  P   + LE    K ++G      FLG    S VD    P+ +R +     E K +  A  PKL  W
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV--ININLKNKPEWFFEK-NPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVP----PLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPWFQRLEAL---ELK-ECLAHTPKLKLW 201          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 62/196 (31.63%), Postives = 95/196 (48.47%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEH-NGKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG------PFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAW 690
            P+ +G  R+Y    CPFAQR  +    KG++ +I  + +NL+++P W+ EK  P   VP LE+  G +I ES+   +Y+D  +    L PDDP ++   K   ELFS + +    + TSF     K+  P   + L+K   K ++        FF G   S +D    P+ +R +     E   D T   PKL  W
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI--ININLKNKPEWFFEK-NPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPS----LVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLEALELNEC-IDHT---PKLKLW 202          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 59/192 (30.73%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHID----TFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAW 690
            P+ +G  R+Y    CPFAQR  +  N KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   EL S +      F      +      ++    F  LE+ L K     F     S +D    P+ ER +     E   D T   PKL  W
Sbjct:   18 PVPEGLIRVYSMRFCPFAQRTLLVLNAKGIRHQV--ININLKNKPEWFFQK-NPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRKEFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLEALELNEC-IDHT---PKLKLW 202          
BLAST of FC923162 vs. ExPASy Swiss-Prot
Match: GSTO1_CAEEL (Glutathione transferase omega-1 OS=Caenorhabditis elegans GN=gsto-1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1
Query:  136 PPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDP----EKRKFADEL 441
            PPL  G+ R+Y    CP+A+RA +    KG++ ++  V LN+ D+  WY  K Y   K PA+EHNGKV+ ES  + +Y+D  F    +LP DP    +++  AD L
Sbjct:   18 PPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEV--VNLNVTDKLEWYWTKHYQ-GKAPAVEHNGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRL 120          
The following BLAST results are available for this feature:
BLAST of FC923162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
IN21B_ORYSJ5.240e-7465.35Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI5.240e-7465.35Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ4.750e-6761.19Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE1.211e-6256.44Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
GSTO1_HUMAN1.501e-1229.69Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_MOUSE1.960e-1231.28Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
GSTO1_RAT2.560e-1231.63Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_PIG4.367e-1230.73Glutathione S-transferase omega-1 OS=Sus scrofa GN... [more]
GSTO1_CAEEL1.659e-1139.62Glutathione transferase omega-1 OS=Caenorhabditis ... [more]
back to top
Properties
Property NameValue
Genbank descriptionC31701G05EF StrClemenN Citrus clementina cDNA clone C31701G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923162 ID=FC923162; Name=FC923162; organism=Citrus clementina; type=EST; length=692bp
GATTTCGGTATCAGGTAACTTTCTTCTTCAAAGCAAAAGAAAAGCTTTCA
GGAAACCTCTAGAGTCTTACCTTCCTCAATGGCAACCACAGCGCAAGAGA
ATCTCCCTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCGAT
GGAACTCCCAGGTTGTACATTTCTTACTCGTGCCCATTTGCTCAGCGTGC
GTGGATCACCAGGAACTACAAGGGATTACAAGACAAGATTAAGTTAGTTC
CACTGAACCTCCGAGATAGGCCCACTTGGTACAAGGAGAAGGTCTATCCT
GTTAACAAGGTTCCAGCACTGGAGCACAATGGCAAAGTTATTGGAGAATC
TCTTGATTTGATTAAATATGTTGACAGCAATTTTGAAGGGCCTTCACTTT
TACCTGATGATCCTGAGAAACGAAAGTTTGCTGATGAACTGTTTTCCCAC
ATCGATACCTTCACCAACGATGTGTACACTTCATTCAAAGGAGACCCAGC
AAAACAAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATAAAT
TTGATGATGGCCCGTTCTTCCTTGGACAGTTCAGTCAGGTGGACATAGCC
TATATTCCATTTGTTGAGAGATTCCAGATCTTCTTATCAGAAGAATTTAA
GTATGACATCACTGCAGGCAGGCCTAAACTGGCAGCATGGAT
back to top