FC923166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 3.873e-42 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 3 Query: 15 KSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 KSNQYPNTSL+QVEGVNT EEV+WY GKR+AYIYKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 25 KSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 6.606e-42 Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 3 Query: 15 KSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 KSNQYPNTSL+Q+EGVNT+EEV WY GKR+AYIYKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 25 KSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.127e-41 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 3 Query: 15 KSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 KSNQYPNTSLIQ+EGVNT+EEV WY GKRLAYIYKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 24 KSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 1.472e-41 Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 3 Query: 15 KSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 KSNQYPNTSL+Q+EGVNT+EEV WY GKRLAYIYKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 24 KSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 3.642e-24 Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 3 Query: 30 PNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 PN SLI++EGV T +E +Y GKR+AY+Y+A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 25 PNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 8.113e-24 Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 3 Query: 30 PNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 PN SLI++EGV T ++ +Y GKR+AY+Y+A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 25 PNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: RL33A_SCHPO (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe GN=rpl33a PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22 Identity = 45/84 (53.57%), Postives = 62/84 (73.81%), Query Frame = 3 Query: 27 YPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 +P TSL+++EG ++KEE +Y GKR+ ++YK+ GS R IWG V+R HGNSGVVRA+F NLPPK+ G +RV +YPSN+ Sbjct: 25 HPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: RL35A_ICTPU (60S ribosomal protein L35a OS=Ictalurus punctatus GN=rpl35a PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.452e-22 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 3 Query: 21 NQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 NQ +T+L++VEGV ++ EV +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF SNLPPK++G R+RV +YPS + Sbjct: 20 NQREHTALLKVEGVYSRNEVDFYLGKRCAYVYKAKKTTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFTSNLPPKAIGHRIRVMLYPSRV 110
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: RL33B_SCHPO (60S ribosomal protein L33-B OS=Schizosaccharomyces pombe GN=rpl33b PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 9.918e-22 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 3 Query: 27 YPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 +P TS++++EG ++KEE +Y GKR+ Y+YK+ GS R IWG +AR HGNSG VRA+F NLP K+ G +RV +YPSNI Sbjct: 25 HPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIRVIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108
BLAST of FC923166 vs. ExPASy Swiss-Prot
Match: RL35A_XENLA (60S ribosomal protein L35a OS=Xenopus laevis GN=rpl35a PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.692e-21 Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 21 NQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 278 NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 20 NQREHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGKPNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110 The following BLAST results are available for this feature:
BLAST of FC923166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923166 ID=FC923166; Name=FC923166; organism=Citrus clementina; type=EST; length=472bpback to top |