FC923221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55 Identity = 105/207 (50.72%), Postives = 140/207 (67.63%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQPL 625 GFS +AF +W + +L++ASAVMLCLE+WY L++ +G L N +S DA+SICM L W + +G++AAISVRVSNELGA +PR A S+VV I++ + F++DA V V DL PLLA+ I +N IQP+LSGVAIG+GWQA VAYVN+ YY+ G+P+G +LG+K LGV GIW GMI+G +LQ L Sbjct: 264 GFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTL 470
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 62/198 (31.31%), Postives = 103/198 (52.02%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGM 598 GFS +A N RL++ +M+C E W F + +G L EL++ ++ + L + +A G+ AA + RV N +GA + + AK + V++ T+N + +F++D +V LV + PL+AL + +N Q V G+ G G Q VN YYL G+P+ +IL +K+D G+ G+W G+ Sbjct: 310 GFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVLGTTELASMSVLSTTSTLSY--NLAFGVAAAAATRVGNLIGAGNTKLAKLATHVSINLGAAIGVIIAVILFLTRNTWTYIFTSDKDVVALVATIIPLVALINIADNTQCVAGGLLRGQGRQRIGGVVNFIAYYLLGLPVAIILCFKLDWGLYGLWIGI 505
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 64/215 (29.77%), Postives = 114/215 (53.02%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQPLYCSG*FIA 649 G+S + + +F RL++ S +MLC+E W + +G L EL A +++ + ++ + M+ +G++ A++VRV N LGA + AK S VA++ + K+ +F++D ++ LV +TP+ A+ + ++ G+ G+G Q A VN YY+ G+P+G+ L + LGV G+W G++ V Q + G FIA Sbjct: 246 GWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVTYELAVI--VYMIPMGLSVAVNVRVGNALGAGNIEQAKKSSAVALLVTELIAVVFCVMLLSCKDLVGYIFTSDRDIIALVAQVTPIYAVSHLFESLAGTSGGILRGSGNQKFGAIVNAIGYYVVGLPIGIALMFAAKLGVIGLWLGIVVCAVSQAVCFLG-FIA 457
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.844e-21 Identity = 61/205 (29.76%), Postives = 104/205 (50.73%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQ 619 G+SW+ + +F+RL++ S +MLC+E W + +G L EL A +++ + I+ + M+ G + A +VRV N LGA + AK S +++I + K+ +F+ D ++ LV + P+ A+ + + G+ G G Q A VN YY+ G+P+G+ L + LGV G+W G+I T Q Sbjct: 247 GWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITYELAII--VYMIPSGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDRDIVALVAQVIPIYAVSHLFEGLACTCGGILRGTGNQKVGAIVNAIGYYVIGLPIGIALMFAAKLGVIGLWSGIIICTTCQ 449
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 63/205 (30.73%), Postives = 103/205 (50.24%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQ 619 G+S + + +F+RL++ S +MLC+E W + +G L EL A ++ + I+ + MV G + A SVRV N LGA A+ S V+++ + K+ +F+ D ++ LV + P+ A+ + + GV G+G Q A VN YY+ G+P+G+ L + LGV G+W G+I TV Q Sbjct: 247 GWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAII--VYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLWSGIIICTVFQ 449
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 70/228 (30.70%), Postives = 109/228 (47.81%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQPLYCSG*FIAPTGNRRLRLRKKE 688 G+S + + F L++ S +M+C+E W + G L +LSA A + + M+ +G++ + VRV LGAA AK S V V+S KNQ +F+ND +V LV + P+ ++ V I V GV G G QA A VN YY+ G+PLG++L + V + + G+W GM++ L + F+A T +L +E Sbjct: 279 GWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQA--VIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFL----ATAAFVAYTARLDWKLAAEE 500
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 61/205 (29.76%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQ 619 G+SW+ + +F++L++ S +MLC+E W + +G L EL A +++ + I+ + M+ G + A +VRV N LGA + AK S +++I + K+ +F+ D ++ LV + P+ A+ + + GV G G Q A VN YY+ G+P+G+ L + LGV G+W G+I +V Q Sbjct: 246 GWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSITYELAII--VYMIPAGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDWDIVALVAQVVPIYAVSHLFEALACTCGGVLRGTGNQKVGAIVNAIGYYVIGLPIGISLMFVAKLGVIGLWSGIIICSVCQ 448
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20 Identity = 59/208 (28.37%), Postives = 107/208 (51.44%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQPLY 628 G+S F AF+RL++AS +MLC+E W F + AG L +L+A A+ + I+ + ++ +G+ A S+RV + LGA + AK S +V + + K+ +F++D N+ LV + P+ + C++ + G+ G+G A + YY+ G+PLG+ L + LG+ G W G+++ + Q ++ Sbjct: 261 GWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAIIYQVAIV--VYLIPLGLCIAGSIRVGHGLGAGNTEQAKRSALVVLCMTELCALLSGILLATLKDVVAYIFTSDPNIVALVSYVLPVYSACLLFDACVAACGGILRGSGKLKVGAISHTVGYYVIGLPLGISLMFAAKLGIIGFWFGILACGIAQSIF 466
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20 Identity = 62/205 (30.24%), Postives = 102/205 (49.76%), Query Frame = 2 Query: 5 GFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMISGTVLQ 619 G+S + + +F+ L++ S +MLC+E W + +G L EL A ++ + I+ + MV G + A SVRV N LGA A+ S V+++ + K+ +F+ D ++ LV + P+ A+ + + GV G+G Q A VN YY+ G+P+G+ L + LGV G+W G+I TV Q Sbjct: 247 GWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSIVYELAII--VYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATKLGVMGLWSGIIICTVFQ 449
BLAST of FC923221 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 64/200 (32.00%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 2 NGFSWKAFHNLWAFVRLSLASAVMLCLEVWYFMALILFAGYLKNAELSADALSICMNILGWIVMVAIGMNAAISVRVSNELGAAHPRTAKFSLVVAVISSFXXXXXXXXXXXXTKNQYPSLFSNDANVRELVIDLTPLLALCIVINNIQPVLSGVAIGAGWQAAVAYVNIGCYYLFGIPLGLILGYKVDLGVKGIWCGMI 601 NG++ + N FV+LSL VM+ E W F + L AG L L+A S+ M + + G+ S RV+ LGA P A + VA I +N Y +F+ND +V +LV + PL+A + +++ + G G G Q A VNI YYLF +PLG+ L + G+ G+W G + Sbjct: 218 NGWNKRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLAAQ--SVIMTTDQLLNTIPFGLGIITSNRVAYYLGAGLPDNASLTAKVAAIVGVAVGSVIMITMIAVRNIYGRIFTNDPDVIQLVALVMPLVAAFQISDSLNGTMGGALRGTGRQKVGAIVNITAYYLFALPLGIYLAFH-GKGLVGLWIGQV 414 The following BLAST results are available for this feature:
BLAST of FC923221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923221 ID=FC923221; Name=FC923221; organism=Citrus clementina; type=EST; length=708bpback to top |