FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.607e-66
Identity = 125/215 (58.14%), Postives = 162/215 (75.35%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 680
            +Y Y ELKKIT  F H +G+GG+G+V+RG L N   VAVK+L+ LKGNG +FINEV ++ +  H +IV LLGFC EG++RA+I EF+ +GSL++FI   + + S  P +   L  IA G+ARG+EYLH GC  RI+HFDIKP NILLD NF PK++DFGLAKLC K  SI+SL   RGT GYIAPE+ SR +G +S+KSDVYSYGM++L+M+G R
Sbjct:  485 QYIYAELKKITKSFSHTVGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNGDDFINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFI---SRNKSLTP-NVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGAR 695          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.795e-65
Identity = 122/214 (57.01%), Postives = 163/214 (76.17%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 680
            YTY ELKKIT  F + +G+GG+G+V+ G L N   VAVK+L+ LKG+ ++FINEVA++ +  H +IV LLGFC EG++RA++YEF+ NGSL++F+    N S  + ++   L  IA G+ARG+EYLH GC  RI+HFDIKP NILLD N  PK+SDFGLAKLC K  S++SL   RGT GYIAPE+FSR +G VS+KSDVYS+GM++++M+G R
Sbjct:  488 YTYAELKKITKSFSYIIGKGGFGTVYGGNLSNGRKVAVKVLKDLKGSAEDFINEVASMSQTSHVNIVSLLGFCFEGSKRAIVYEFLENGSLDQFM--SRNKSLTQDVT--TLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMIGAR 697          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.013e-47
Identity = 101/217 (46.54%), Postives = 145/217 (66.82%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            T N  RY+Y+EL K T +FK  LG+G  G+V++G L +   VAVK LE+++   + F  E++ IGRI+H ++VR+ GFCSEG+ R L+ E++ NGSL   +FS+     +  L WE    IA GVA+G+ YLH  C + ++H D+KP NILLD  F+PKI+DFGL KL ++  S  +++  RGT GYIAPE  S     ++ K DVYSYG++LLE++
Sbjct:  518 TSNFRRYSYRELVKATRKFKVELGRGESGTVYKGVLEDDRHVAVKKLENVRQGKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSE---GGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSL--PITAKVDVYSYGVVLLELL 729          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.349e-45
Identity = 96/201 (47.76%), Postives = 133/201 (66.17%), Query Frame = 3
Query:   78 KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ---EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++ LGQGG+G+V++G L N   VAVK L   KG+GQ   EF NEV+ + R+ H ++V+LLGFC+EG+ + L+YEF+PN SL+ FIF     S    L+WE   +I  G+ARG+ YLH+    +I+H D+K  NILLD    PK++DFG A+L   D +        GT GY+APE    N G++S KSDVYS+G+MLLEM+
Sbjct:  356 ENTLGQGGFGTVYKGTLLNGQEVAVKRLT--KGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSL---LTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYL--NHGQISAKSDVYSFGVMLLEMI 549          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.060e-44
Identity = 92/218 (42.20%), Postives = 135/218 (61.93%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKML-EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +V  ++Y +K ++  T+ F  RLG GG G VF+G+L +   +AVK L E  + + +EF NEV  + ++ H ++VRLLGF  +G  + ++YE++PN SL+  +F  T       L W+K  KI  G ARG+ YLHQ     I+H D+K  NILLD +  PK++DFG A++   D S+     A GT GY+APE      GE S KSDVYSYG+++LE++
Sbjct:  342 SVRSLQYKFKTIETATNNFSERLGHGGSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGE---LDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYM--ELGEFSMKSDVYSYGVLVLEII 554          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 7.914e-44
Identity = 92/224 (41.07%), Postives = 138/224 (61.61%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            T + +++++K ++  T +F   + +G+GG+G V+RGKL +   VAVK L    G G +EF NE   + ++ H ++VRLLGFC EG  + L+YEF+PN SL+ F+F          L W +   I  G+ARG+ YLHQ     I+H D+K  NILLD +  PKI+DFG+A++   D S  +     GT GY++PE   R  G  S KSDVYS+G+++LE++  +K
Sbjct:  327 TTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGE---LDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMR--GHFSMKSDVYSFGVLVLEIISGKK 545          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43
Identity = 95/201 (47.26%), Postives = 132/201 (65.67%), Query Frame = 3
Query:   78 KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ---EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++ LGQGG+G+V++G   N   VAVK L   KG+GQ   EF NEV+ + R+ H ++V+LLGFC+EG+   L+YEF+PN SL+ FIF +   S    L+WE   +I  G+ARG+ YLH+    +I+H D+K  NILLD    PK++DFG A+L   D +        GT GY+APE    N G++S KSDVYS+G+MLLEM+
Sbjct:  351 ENTLGQGGFGTVYKGTFPNGQEVAVKRLT--KGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSL---LTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYL--NHGQISAKSDVYSFGVMLLEMI 544          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43
Identity = 91/224 (40.62%), Postives = 139/224 (62.05%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            T   +++ +K ++  T+ F   ++LGQGG+G V++G L + + VAVK L    G G+ EF NEV  + ++ H ++V+LLG+C EG  + L+YEF+PN SL+ F+F  T       L W +  KI  G+ARG+ YLHQ     I+H D+K  NILLD +  PKI+DFG+A++   D +        GT GY++PE     +G+ S KSDVYS+G+++LE++   K
Sbjct:  308 TAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMK---LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEY--AMYGQFSMKSDVYSFGVLVLEIISGMK 526          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43
Identity = 89/220 (40.45%), Postives = 136/220 (61.82%), Query Frame = 3
Query:   33 IRYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +++  K ++  TS F  R  LG+GG+G V++G L N   +AVK L    G G+ EF NEV  + ++ H ++VRLLGF  +G  + L+YEF+ N SL+ F+F  T  +    L W   R I  G+ RG+ YLHQ    +I+H D+K  NILLD +  PKI+DFG+A++   D ++ +     GT GY++PE  +   G+ S KSDVYS+G+++LE++  +K
Sbjct:  325 VQFDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFDPTKRNQ---LDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTH--GQFSMKSDVYSFGVLILEIISGKK 539          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43
Identity = 99/224 (44.20%), Postives = 145/224 (64.73%), Query Frame = 3
Query:   30 PIRYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE--GNR-RALIYEFMPNGSLEKFIFSKTNS---SSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            P ++  ++L++ T  F+  +G+GG GSVF+G L +   VAVK +E  +   +EF +EVA I  + H ++VRL G+ S    NR R L+Y+++ N SL+ +IF    +   S    LSWE+  ++A  VA+ + YLH  C  +ILH D+KP NILLD NF+  ++DFGL+KL ++D S V LT  RGT GY+APE    +   +S KSDVYSYG++LLEM+G R+
Sbjct:   90 PTKFKLEDLEEATDGFRSLIGKGGSGSVFKGVLKDGSQVAVKRIEGEEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRV-LTDIRGTRGYLAPEWLLEH--GISEKSDVYSYGIVLLEMIGGRR 310          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5392_ARATH9.607e-6658.14Probable receptor-like protein kinase At5g39020 OS... [more]
Y5393_ARATH2.795e-6557.01Probable receptor-like protein kinase At5g39030 OS... [more]
KPRO_MAIZE2.013e-4746.54Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
CRK39_ARATH9.349e-4547.76Putative cysteine-rich receptor-like protein kinas... [more]
CRK13_ARATH6.060e-4442.20Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
CRK35_ARATH7.914e-4441.07Putative cysteine-rich receptor-like protein kinas... [more]
CRK40_ARATH1.034e-4347.26Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK19_ARATH2.303e-4340.63Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK18_ARATH2.303e-4340.45Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y5005_ARATH3.928e-4344.20Probable receptor-like protein kinase At5g20050 OS... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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