FC923312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.814e-50 Identity = 85/125 (68.00%), Postives = 107/125 (85.60%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESISNF 377 GGFE++++Q F T NETLKKTFACYLST+TGPVAGT+YLSN VAFCSDRPL FTAPSGQ++WSYY+V++PLA + +NPV+++E EKYIQ+ T+DGH+FWFMGF NY+KAT HL S+S+F Sbjct: 139 GGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDF 263
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.576e-33 Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESI 368 GG+E I++QTF T E L +FACYLSTS GPV G LY+S+ +A+CSD PLS+ Q WSYYKV++PL + A+NP N +EKYIQ++++D HEFWFMGF NYD A L +S+ Sbjct: 171 GGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKN-GDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.496e-33 Identity = 66/125 (52.80%), Postives = 89/125 (71.20%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKT-WSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESISN 374 GG+E ++KQTF +E L KT+ACYLSTS GPV G +YLS +AF SD PLS+ G++T WSYYKV+LP + A+NP R N+S+KYIQ+++ID HEFWFMGF Y+ A + L E++ + Sbjct: 134 GGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYK--EGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAVQS 256
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26 Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESIS 371 GG E IYK+ F E L K + CYLST+ GP+AG L++S+ +AFCS+R + +P G+ +YKV +PL I +N S+KY+++VT+DG +FWFMGF +Y KA L +++S Sbjct: 92 GGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 3.984e-26 Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESISN 374 GG E IYK+ F E L K + CYLST+ GP+AG L++S+ +AFCS+R + +P G + +YKV +PL I +N + S+KY++IVTID +FWFMGF +Y KA L ++++N Sbjct: 92 GGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNN 215
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.977e-25 Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESIS 371 GG E IYK+ F E L K + CYLST+ G +AG L++S+ +AFCS+R + T+P G T +YKV +PL I +N + S++Y+++VT+D ++FWFMGF +Y KA L ++++ Sbjct: 84 GGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALN 206
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 1.977e-25 Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESI 368 GG+E I++QTF T E L+ +FACYLSTS GPV G LY+S +A+CSD L V++PL + ++NP I N +EKYIQ++++D HEFWFMGF NY+ A L +++ Sbjct: 124 GGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTL 230
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.582e-25 Identity = 52/123 (42.28%), Postives = 79/123 (64.23%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSFTAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESIS 371 GG E I+K+ F + E L K + CYLST+ GP+AG L++S+ +AFCS+R + +P G +YKV +PL I +N + S+KY+++VT+DG +FWFMGF +Y KA L +++S Sbjct: 91 GGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213
BLAST of FC923312 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.117e-19 Identity = 48/125 (38.40%), Postives = 75/125 (60.00%), Query Frame = 3 Query: 3 GGFETIYKQTFATHQNETLKKTFACYLSTSTGPVAGTLYLSNVHVAFCSDRPLSF-TAPSGQKTWSYYKVMLPLAMIGAINPVIMRENSSEKYIQIVTIDGHEFWFMGFGNYDKATRHLSESISN 374 GG E ++++ F E L +F CY+ST++GPV G +Y+SN +AFCSD + ++ G +YYKV++ I +I+ SE+Y+ +VT DG EFWFMGF +Y A L++++ N Sbjct: 102 GGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKALLN 226 The following BLAST results are available for this feature:
BLAST of FC923312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923312 ID=FC923312; Name=FC923312; organism=Citrus clementina; type=EST; length=598bpback to top |