FC923314

Overview
NameFC923314
Unique NameFC923314
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14437 contig Ccv1_Contig14437:1..693. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.043e-68
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQA+EL+ DFF +CKE+P+HW K    GL+
Sbjct:  667 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQ 749          

HSP 2 Score: 129.028 bits (323), Expect = 5.043e-68
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 3
Query:  225 KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 422
            K+SDGGL+RIYERYTWKIYSERLMTLAGVY FWKYVSKLERRETRRYLEMFYILKFRDL  SVP+A
Sbjct:  742 KVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 1.720e-62
Identity = 62/83 (74.70%), Postives = 66/83 (79.52%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KG FVQPAFYEAFGLTVVE+MTC LPTFATCHGGPAEIIE+G SGFHIDPYHPDQ A  +  FF  C  NP+HW K    GLK
Sbjct:  661 KGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLK 743          

HSP 2 Score: 122.865 bits (307), Expect = 1.720e-62
Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 3
Query:  225 KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 428
            KIS+GGLKRIYERYTWK YSERL+TLAGVY FWK+VSKLERRETRRYLEMFY LKFRDL  S+PLA++
Sbjct:  736 KISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.209e-61
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 1
Query:    4 GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGL 246
            G F QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE G SGFHIDPYH DQ AE M +FF KC+E+P++W K    GL
Sbjct:  611 GIFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHADQ-AEKMTEFFVKCREDPNYWTKISAGGL 690          

HSP 2 Score: 122.479 bits (306), Expect = 9.209e-61
Identity = 59/70 (84.29%), Postives = 63/70 (90.00%), Query Frame = 3
Query:  225 KISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQ 434
            KIS GGL RI ERYTW+ YSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDL  SVPLA++ +
Sbjct:  684 KISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEE 753          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.262e-35
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEII HG SGFHIDPYH +QAA+L+ADFF KCK++PSHW+   M GLK
Sbjct:  663 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLK 745          

HSP 2 Score: 105.145 bits (261), Expect = 3.564e-22
Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 3
Query:  222 EKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 428
            E IS GGLKRI E+YTW+IYSE L+TLA VYGFWK+VSKL+R E RRYLEMFY LK+R + ++VPLA+E
Sbjct:  737 ETISMGGLKRIEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.059e-34
Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEII HG SGFHIDPYH +QAA+L+ADFF KCK+ PSHW+     GLK
Sbjct:  663 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLK 745          

HSP 2 Score: 109.383 bits (272), Expect = 1.890e-23
Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 3
Query:  186 FLWKVQGKSKPLEKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 428
            F  K + +    E IS GGLKRI E+YTW+IYSERL+TLA VYGFWK+VSKL+R E RRYLEMFY LK+R + ++VPLA+E
Sbjct:  725 FFEKCKKEPSHWETISTGGLKRIQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.301e-34
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KGAFVQPAFYEAFGLTVVE+MTCGLPTFATCHGGPAEII HG SGFHIDPYH D+A+E +  FF KCKE+P+HW+K    GL+
Sbjct:  662 KGAFVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGFHIDPYHGDKASEQLVSFFEKCKEDPAHWEKISQGGLQ 744          

HSP 2 Score: 126.331 bits (316), Expect = 1.494e-28
Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 3
Query:  222 EKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASEN 431
            EKIS GGL+RIYE+YTWK+YSERLMTLAGVYGFWKYVS L+RRETRRYLEMFY LK+R+L KSVPLA +N
Sbjct:  736 EKISQGGLQRIYEKYTWKLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAIDN 805          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 9.042e-34
Identity = 66/83 (79.52%), Postives = 71/83 (85.54%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KGAFVQPA YEAFGLTVVEAMTCGLPTFATC GGPAEII HG SGFHIDPYH DQAA+ +ADFF KCKE+PSHW +    GL+
Sbjct:  665 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747          

HSP 2 Score: 104.375 bits (259), Expect = 6.079e-22
Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 3
Query:  186 FLWKVQGKSKPLEKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASEN 431
            F  K +      ++IS GGL+RI E+YTW+IYS+RL+TL GVYGFWK+VS L+R E RRYLEMFY LK+R L ++VPLA ++
Sbjct:  727 FFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDD 808          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.705e-32
Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            +GAFVQPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D+AA+L+ DFF KCK +P+HW K    GL+
Sbjct:  663 RGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQ 745          

HSP 2 Score: 108.612 bits (270), Expect = 3.223e-23
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 3
Query:  222 EKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 428
            +KIS  GL+RI E+YTW+IYS+RL+TL GVYGFWK+VS L+RRE+RRYLEMFY LK+R L +SVPLA+E
Sbjct:  737 DKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUS2_DAUCA (Sucrose synthase isoform 2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.705e-32
Identity = 63/83 (75.90%), Postives = 70/83 (84.34%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KGAFVQPAFYEAFGLTV+EAMTCGLPTFAT HGGPAEII HG SGFHIDPYH ++AAEL+ +FF +CK  PSHW+     GLK
Sbjct:  659 KGAFVQPAFYEAFGLTVIEAMTCGLPTFATIHGGPAEIIVHGTSGFHIDPYHGEKAAELIVNFFERCKTEPSHWETISAGGLK 741          

HSP 2 Score: 105.531 bits (262), Expect = 2.729e-22
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 3
Query:  222 EKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 422
            E IS GGLKRI E+YTW+IYSERL+TL GVYGFWK+VSKL+R E RRYLEMF  LK+R+L +SVPLA
Sbjct:  733 ETISAGGLKRIQEKYTWQIYSERLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLA 799          
BLAST of FC923314 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32
Identity = 64/83 (77.11%), Postives = 68/83 (81.93%), Query Frame = 1
Query:    1 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKSLMEGLK 249
            KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEII HG SGFHIDPYH +Q AEL+ +FF KCK +PS W      GLK
Sbjct:  665 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLK 747          

HSP 2 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 3
Query:  186 FLWKVQGKSKPLEKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 428
            F  K +      + IS GGLKRI E+YTW+IYSERL+TLAGVYGFWK+VSKL+R E RRYLEMFY LK+R L +SVPLA +
Sbjct:  727 FFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKD 807          
The following BLAST results are available for this feature:
BLAST of FC923314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SUS2_PEA5.043e-6881.93Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUS2_ARATH1.720e-6274.70Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUSY_BETVU9.209e-6176.54Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS1_SOLTU6.262e-3581.93Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_SOLLC4.059e-3480.72Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS1_TULGE5.301e-3477.11Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS1_ARATH9.042e-3479.52Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_SOYBN1.705e-3275.90Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUS2_DAUCA1.705e-3275.90Sucrose synthase isoform 2 OS=Daucus carota PE=2 S... [more]
SUS1_DAUCA6.480e-3277.11Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC31703F03EF StrClemenN Citrus clementina cDNA clone C31703F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923314 ID=FC923314; Name=FC923314; organism=Citrus clementina; type=EST; length=692bp
AAAGGTGCTTTTGTGCAGCCTGCTTTTTATGAAGCTTTTGGATTAACAGT
TGTGGAAGCTATGACTTGTGGACTTCCGACATTCGCCACTTGCCATGGTG
GTCCTGCAGAGATTATCGAGCATGGTGCGTCAGGGTTCCATATTGATCCA
TATCACCCTGATCAAGCTGCTGAACTCATGGCAGATTTCTTTGGAAAGTG
CAAGGAAAATCCAAGCCATTGGAAAAAATCTCTGATGGAGGGCTTAAAAG
GATTTATGAAAGGTACACCTGGAAGATTTATTCTGAAAGGCTAATGACAT
TGGCTGGGGTATATGGTTTCTGGAAGTATGTTTCAAAACTTGAGAGGCGT
GAGACCCGGAGGTACCTTGAGATGTTCTACATTCTAAAGTTCCGTGATTT
GGTGAAGTCTGTTCCTTTGGCAAGTGAGAACCAACATTAAGCTGCTGGTA
TTCAAGGAACTGCTAATAATTACCCAGCTACCTCCCGTAACTATAGTGCA
AAAATAAAGAGTACTTTTTGTATGTATATGTAATGCTTTATGTTGTATGG
TTAAAAGGATATTCGAGCCTCTCGACACTTAAATCTTCCTGTGCTATTCT
CGACAGTGTTCACAATCGTGGCTGTCGTTAAAATTTGATTGCTAAGACAT
TTTAATATTATTATGTTTTCTTGAAAAAAAAAAAAAAAAAAA
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