FC923330

Overview
NameFC923330
Unique NameFC923330
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12749 contig Ccv1_Contig12749:145..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923330 vs. ExPASy Swiss-Prot
Match: MTL10_HUMAN (Methyltransferase-like protein 10 OS=Homo sapiens GN=METTL10 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 49/126 (38.89%), Postives = 65/126 (51.59%), Query Frame = 1
Query:  220 SDKEEPDPEGMA-SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDXITL 594
            SDK  P  +G   S LG + +WD+ Y  EL  FRE+G  GE+WFG + M+ +  W +   I +                           SVLDIGTGNG+ L EL+K GFS++TG+DYS   I L
Sbjct:   17 SDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRWMQKHKIPLDA-------------------------SVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQL 117          
BLAST of FC923330 vs. ExPASy Swiss-Prot
Match: MTL10_DANRE (Methyltransferase-like protein 10 OS=Danio rerio GN=mettl10 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1
Query:  256 SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDXITL 594
            S LG + YWD AY  EL  +++ G  GE+WFG + M  V  W                   ++++ + EN       ++LDIGTGNG+ L EL++ GFS+LTG+DYS+  + L
Sbjct:   26 SKLGTKEYWDGAYKRELQTYKDIGDVGEIWFGEESMHRVIRW-------------------MEAQNISENA------AILDIGTGNGMFLVELARHGFSNLTGIDYSKAALEL 113          
BLAST of FC923330 vs. ExPASy Swiss-Prot
Match: MTL10_MOUSE (Methyltransferase-like protein 10 OS=Mus musculus GN=Mettl10 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14
Identity = 43/113 (38.05%), Postives = 58/113 (51.33%), Query Frame = 1
Query:  256 SMLGLQSYWDSAYADELANFREHGHAGEVWFGADVMDVVASWTKSLCISISQGHMLNHVEDLKSEPVEENDKYLSSWSVLDIGTGNGLLLQELSKQGFSDLTGVDYSEDXITL 594
            S LG + +WD+ Y  EL  F+E+G  GE+WFG + M+ +  W +   I +                           SVLDIGTGNG+ L EL K GFS++TG+DYS   I L
Sbjct:   30 SALGTREHWDAVYERELRTFQEYGDTGEIWFGEESMNRLIRWMQKHKIPLDA-------------------------SVLDIGTGNGVFLVELVKHGFSNITGIDYSPSAIKL 117          
The following BLAST results are available for this feature:
BLAST of FC923330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MTL10_HUMAN9.700e-1738.89Methyltransferase-like protein 10 OS=Homo sapiens ... [more]
MTL10_DANRE5.323e-1537.17Methyltransferase-like protein 10 OS=Danio rerio G... [more]
MTL10_MOUSE1.186e-1438.05Methyltransferase-like protein 10 OS=Mus musculus ... [more]
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Properties
Property NameValue
Genbank descriptionC31703H02EF StrClemenN Citrus clementina cDNA clone C31703H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923330 ID=FC923330; Name=FC923330; organism=Citrus clementina; type=EST; length=680bp
CGATTGCCGCCGGAAGAACCCGAGGTTTCGCCGCAACAGCCGCCGCAGCA
GGTCCGCATCGCGGGCGATCTAGTGTCTGACGACGAGCGGTCAGTCGCTG
CGGACTCGTGGTCAATAAAGAGCGAGTATGGAAGCACTCTCGACGATGAT
CAGCGCCACGCCGATGCCGCTGAGGCCCTCTCCTCCGCCGCAAACTTCCG
CGCTAATTCTGATTACAATTCTGACAAGGAGGAGCCAGATCCAGAAGGGA
TGGCATCAATGTTAGGTCTTCAGAGTTACTGGGATTCTGCTTACGCAGAT
GAGTTGGCTAATTTTCGTGAACATGGCCATGCTGGTGAAGTTTGGTTTGG
AGCTGATGTCATGGATGTTGTTGCTTCTTGGACAAAAAGCTTGTGCATTA
GCATATCACAAGGTCACATGCTGAATCATGTTGAAGATCTTAAGTCTGAG
CCTGTGGAAGAGAATGATAAGTATTTGTCTTCTTGGAGTGTACTTGATAT
TGGTACTGGCAATGGTCTGCTTCTTCAAGAACTTTCCAAGCAGGGGTTCT
CTGATTTAACTGGAGTTGATTATAGTGAAGATGNCATAACCTTGCTCAAG
CCTTGCTAATCGTGATGGATTTTCTGTATTAATTTTTGGTTGATGATGTC
TTTGAACAAGCTCGAAAGACATTCAGCTGT
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