FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 5.010e-68
Identity = 127/228 (55.70%), Postives = 175/228 (76.75%), Query Frame = 2
Query:   35 DEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASL------ESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            + ++I+++DG++ +Q++I+AT +FD KY IGTGG+  VY+A+LP+  ++A+KKL+  ET  +S+      + F NE R L++IRHRN+VKL+GFC H +  FL+YEYME GSL  +L  D+EA  LDW KR+N+VKG+AHALSY+HH  +P I+HRDISS NILL  ++EA ++DFG A+LL  DSSN + +AGTYG +APELAY M VTEK DVYSFGV+ LEV+ G
Sbjct:  752 ETLSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNA-IMAVKKLN--ETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKG 976          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.234e-66
Identity = 127/235 (54.04%), Postives = 173/235 (73.62%), Query Frame = 2
Query:   35 DEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLH-RLETELAS---LESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSSS 727
            + ++I++ DG+  +QD+IE+T +FD  + IGTGGY  VYRA L    ++A+K+LH  ++ E++     + F NE + L++IRHRN+VKL+GFC H +  FLIYEYME GSL  +L  DEEA  L WTKR+N+VKG+AHALSY+HH    PI+HRDISS NILL++++ A ++DFG A+LL  DSSN + +AGTYG +APE AYTM VTEK DVYSFGV+ LE+++G     L SS
Sbjct:  828 ENMSIFSVDGKFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQD-TIIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSS 1061          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.376e-48
Identity = 105/220 (47.73%), Postives = 139/220 (63.18%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLH-----RLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE--KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD-SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            R T +D++EAT+ F   Y +G G   +VY+A +PSGK +A+KKL             +  SF+ E   L +IRHRNIV+LY FC H+      L+YEYM  GSL  +L   +    +DW  R  I  G A  L+YLHH C P I+HRDI SNNIL++  FEA V DFG+A++++   S + + +AG+YG IAPE AYTM VTEK D+YSFGVV LE+L G
Sbjct:  806 RFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSH-SMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTG 1024          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.494e-45
Identity = 96/224 (42.86%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   68 ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH--EKCMFLIYEYMEMGSLFCILRTDEEAVG-----LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL----NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSI 706
            I ++D++EAT +   ++ IG+GG   VY+A L +G+ VA+KK+   + +L S +SF  E + L +IRHR++VKL G+C    E    LIYEYM+ GS++  L  D+  +      LDW  R+ I  G+A  + YLHH C PPI+HRDI S+N+LL+S  EA + DFG+A++L    + ++ + T  A +YG IAPE AY++  TEK DVYS G+V +E++ G +
Sbjct:  939 IRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKI-LWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKM 1161          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.016e-44
Identity = 96/222 (43.24%), Postives = 144/222 (64.86%), Query Frame = 2
Query:   68 ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK--CMFLIYEYMEMGSLFCILRTDEEAVG---LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL--NYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSI 706
            I + D++EAT   + ++ IG+GG   VY+A L +G+ +A+KK+   + +L S +SF  E + L  IRHR++VKL G+C  +      LIYEYM  GS++  L  +E       L W  R+ I  G+A  + YLH+ C PPI+HRDI S+N+LL+S  EA + DFG+A++L  NYD++  + T+ AG+YG IAPE AY++  TEK DVYS G+V +E++ G +
Sbjct:  936 IKWDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKI-LWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKM 1156          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.958e-44
Identity = 98/219 (44.75%), Postives = 141/219 (64.38%), Query Frame = 2
Query:   68 ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRL----ETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL----NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            IT  +++ +  D ++   IG G    VY+A +P+G +VA+KKL +     E   ++++SF  E ++L  IRHRNIVKL G+C ++    L+Y Y   G+L  +L+ +     LDW  R  I  G A  L+YLHH C P ILHRD+  NNILL+S++EA +ADFG+A+L+    NY ++  + +AG+YG IAPE  YTM +TEK DVYS+GVV LE+L G
Sbjct:  763 ITVNNIVTSLTDENV---IGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQGNRN---LDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNA-MSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSG 974          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.589e-44
Identity = 93/211 (44.08%), Postives = 130/211 (61.61%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            TF D++  TE+ + K+ IG G   +VY+  L S + +A+K+L+       +L  F+ E   +  IRHRNIV L+G+ L      L Y+YME GSL+ +L    + V LDW  R+ I  G A  L+YLHH CTP I+HRDI S+NILL+  FEA ++DFGIA+ +    ++  T + GT G I PE A T  + EK D+YSFG+V LE+L G
Sbjct:  637 TFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQYPH--NLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTG 845          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.124e-43
Identity = 94/214 (43.93%), Postives = 132/214 (61.68%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEA-VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY-DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            R T ++++ AT++F  K  +G GG+  VY+ RL  G +VA+K+L    T+   L+ FQ E  ++S   HRN+++L GFC+      L+Y YM  GS+   LR   E    LDW KR +I  G A  L+YLH HC   I+HRD+ + NILL+ EFEA V DFG+A+L+NY DS   T + GT G IAPE   T   +EK DV+ +GV+ LE++ G
Sbjct:  281 RFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 493          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.514e-43
Identity = 101/238 (42.44%), Postives = 144/238 (60.50%), Query Frame = 2
Query:    8 GTVEITKCADEI----AIWNYDGRITF--QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            G VEI   A ++    +I  + G + +  +D+I+  E  + ++ IG GG+ +VY+  +  GKV ALK++ +L         F+ E  +L  I+HR +V L G+C       L+Y+Y+  GSL   L   E    LDW  RVNI+ G A  LSYLHH C+P I+HRDI S+NILL+   EA V+DFG+A+LL  + S+  T++AGT+G +APE   +   TEK DVYSFGV+ LEVL G
Sbjct:  268 GKVEIKSLAKDVGGGASIVMFHGDLPYSSKDIIKKLEMLNEEHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRF--FERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH--ERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSG 501          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.623e-42
Identity = 99/203 (48.77%), Postives = 131/203 (64.53%), Query Frame = 2
Query:  122 IGTGGYDSVYRARLPSGKVVALKKLHRLETELASLES-FQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEE--AVG-LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS------NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            IG+GG   VYR +L SG+ +A+KKL     +    ES F++E   L ++RH NIVKL   C  E+  FL+YE+ME GSL  +L +++E  AV  LDWT R +I  G A  LSYLHH   PPI+HRD+ SNNILL+ E +  VADFG+A+ L  + +      + + +AG+YG IAPE  YT  V EK DVYSFGVV LE++ G
Sbjct:  692 IGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITG 894          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4885_ARATH5.010e-6855.70Probable LRR receptor-like serine/threonine-protei... [more]
Y1571_ARATH1.234e-6654.04Probable leucine-rich repeat receptor-like protein... [more]
Y2317_ARATH3.376e-4847.73Probable leucine-rich repeat receptor-like protein... [more]
GSO1_ARATH3.494e-4542.86LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH1.016e-4443.24LRR receptor-like serine/threonine-protein kinase ... [more]
Y1341_ARATH2.958e-4444.75Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH6.589e-4444.08LRR receptor-like serine/threonine-protein kinase ... [more]
SERK4_ARATH1.124e-4343.93Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
FEI1_ARATH9.514e-4342.44LRR receptor-like serine/threonine-protein kinase ... [more]
HSL2_ARATH1.623e-4248.77LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
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