FC923343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.146e-47 Identity = 97/172 (56.40%), Postives = 129/172 (75.00%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCG 648 MVRGK QMK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEV++IIFS KG+L+EF+SS MQ T++RY R+T++R + E MQ LK+E ANM++KIE +E S+RKLLG+ +G+ + +S++ IRARK Q+F EQ+ QLK+KE+ L +N +L K G Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWG 172
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.369e-41 Identity = 90/175 (51.43%), Postives = 122/175 (69.71%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKP 657 MVRGK QMK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +G+L+EF+S+ QKT+ERY YT+E I +++ ++Q+K + + +K+E +E +RKLLG+ L + RSL SIR RK +L EQ+ +L+EKE L +DN L KC +P Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKE-NIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQP 174
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.198e-38 Identity = 89/172 (51.74%), Postives = 117/172 (68.02%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEF-SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKC 645 MVRGK +MK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+IIFS +G+L+EF SSS + KT+ERY + ++ + + QQ K E + KIEH+E+S RK++G+ L + + RSL IRA+K QL E+ +LKEKER L+ +N L KC Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDN-SQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKC 171
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.565e-38 Identity = 81/168 (48.21%), Postives = 123/168 (73.21%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEFSSS-EMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 633 MVRG+ ++K+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +GRL+EF+S+ +QKT++RY YT++ ++ +++ +QQ+K + + +K+E ++ S+RK+LG++L + +SL IR +K +L +Q+ +LKEKER LL+DN L Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENL 167
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38 Identity = 81/168 (48.21%), Postives = 123/168 (73.21%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEFSSS-EMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 633 MVRG+ ++K+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA+I+FS +GRL+EF+S+ +QKT++RY YT++ ++ +++ +QQ+K + + +K+E ++ S+RK+LG++L + +SL +IR +K +L Q+ +LKEKER LL+DN L Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENL 167
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36 Identity = 85/168 (50.60%), Postives = 116/168 (69.05%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEFSSSEMQKTLERYYRYTEERQIDRNGMER-YMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 633 MVRGK +MK+IEN TSRQVTFSKRRNG+LKKA+ELSVLCDAEVA++IFS + +L+EFSSS + T+ERY R +E I N QQ + E + + +KIE +E+S+RKLLG+ + + + RSL IRA+K QL E++ +LK +ER L+++N L Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKE--IGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDL 166
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34 Identity = 80/167 (47.90%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 633 M RG++++K+IEN +RQVTFSKRRNG+LKKAYELSVLCDAEVA+IIFS +G+L+EF S+ + KTLERY Q N + Q HE++ + K E ++ +QR LLG+DLG + +L R RK QL EQ+ +L+ KER L E N +L Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSE-TQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQL 166
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.586e-33 Identity = 81/183 (44.26%), Postives = 112/183 (61.20%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEF-SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTPR 678 M RGK+ +++IEN SRQVTF+KRRNG+LKKAYELS+LCDAEVA+++FS GRL++F SSS M KTLERY RY Q MQ E N+ +E ++ SQR LLG+DL R+L+ IR+RK Q+ +++ LK KE++L + N L K + + + P+ Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAAPPQ 183
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32 Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEF-SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIK 642 M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+L+EF SSS M KTL+RY + + N + ++ E + + E+++ QR LLG+DLG + SL+ +R+ K Q +Q+ L+ KE++LLE N L +K Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMK 171
BLAST of FC923343 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.734e-32 Identity = 80/175 (45.71%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 133 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLHEF-SSSEMQKTLERYYRYT----EERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIK 642 M RG++++K+IEN +RQVTF+KRRNG+LKKAYELSVLCDAEVA+I+FS +G+L+EF S+S M KTLERY R + E Q + Y + LK + K++ ++ S R LLG+DLG + +SLR IR+ K Q +Q+ L++KE +L E N L K Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLK-----LKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTK 170 The following BLAST results are available for this feature:
BLAST of FC923343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923343 ID=FC923343; Name=FC923343; organism=Citrus clementina; type=EST; length=686bpback to top |