FC923352

Overview
NameFC923352
Unique NameFC923352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14517 contig Ccv1_Contig14517:31..728. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_ARATH (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.358e-69
Identity = 136/192 (70.83%), Postives = 156/192 (81.25%), Query Frame = 2
Query:  125 MAVRVVTRNLGXXXXXXXXXXXXXXXHATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQD-QSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            MA+R V+R LG               HATSFGF+EV  EEKS+LV NVF++VA +YD+MND+MSGGLHRLWK+RLV KL+PF GMKHLDVAGGTGDVAFRI D V S+KRRALQ V E  L EET+IYVCDINPNMLNVGK+RA ERG +D +SL+WVEGDAEAL F+D++MDGYTIAFGIRN THIEKALA
Sbjct:    1 MALRSVSRRLGSRILNQRSFVASLHSHATSFGFQEVKEEEKSKLVGNVFTNVASSYDIMNDVMSGGLHRLWKERLVGKLSPFAGMKHLDVAGGTGDVAFRIYDAVYSVKRRALQKVDEASL-EETQIYVCDINPNMLNVGKQRAAERGLRDNKSLVWVEGDAEALSFDDNSMDGYTIAFGIRNVTHIEKALA 191          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_ORYSJ (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.346e-68
Identity = 126/166 (75.90%), Postives = 145/166 (87.35%), Query Frame = 2
Query:  203 HATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQD-QSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            HATSFG+K+V  E+KS+LV NVFSSVA +YDLMNDLMS GLHRLWKDRL+SKLNPFPGMKHLDVAGGTGDVAFR L+ +NS+  RA+Q  L  D++EET+IYVCDINPNMLNVGKKRA ERGY++   L W++GDAEAL FED +MDGYTIAFGIRN THIEKAL+
Sbjct:   33 HATSFGYKQVAEEDKSKLVGNVFSSVASSYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVAFRALERINSVSHRAMQGTL-TDIEEETQIYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALS 197          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_HUMAN (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Homo sapiens GN=COQ5 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.325e-40
Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKR-------RALQDVLEDDLQEE----------TRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF+ V  EEK   V  VF SVAK YD+MND+MS G+HR+WKD L+ K++P PG + LDVAGGTGD+AFR L+ V S  +       RA Q++  +++ +E          +R+ VCDIN  ML VGK++AL +GY+   L WV GDAE L F+D   D YTIAFGIRN THI++AL
Sbjct:   52 THFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVGKQKALAQGYR-AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQAL 229          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_DANRE (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Danio rerio GN=coq5 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.913e-39
Identity = 90/180 (50.00%), Postives = 113/180 (62.78%), Query Frame = 2
Query:  206 ATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRR-----------------ALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            +T FGF+ VP EEK++ V  VF SVAK YD+MND MS G+HRLWKD L+  +NP PG++ LD AGGTGD++FR L+   S+  R                 A   V +++   ++R  VCDIN  ML VGK+RA + G     L WV GDAE L F+D   D YTIAFGIRN THIE+AL
Sbjct:   51 STHFGFQTVPEEEKAEKVYKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEYTRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDAGI-TTGLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQAL 229          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_BOVIN (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Bos taurus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.913e-39
Identity = 88/179 (49.16%), Postives = 114/179 (63.69%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL-----------------EDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF+ V  EEK   V  VF SVAK YD+MND+MS G+HR+WKD L+ K+ PFPG + LDVAGGTGD+AFR L+ V +  +R  +  L                 E+D    + + VCDIN  ML +GK++A  +GY+   L W+ GDAE L F+D+  D YTIAFGIRN THI++AL
Sbjct:   52 THFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPFPGTQLLDVAGGTGDIAFRFLNYVQAQHQRKQKRQLRAQQNLSWEEIARKYQNEEDSLGGSHVMVCDINKEMLKIGKQKARAQGYK-AGLAWILGDAEELPFDDNKFDVYTIAFGIRNVTHIDQAL 229          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_PONAB (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Pongo abelii GN=COQ5 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 90/179 (50.28%), Postives = 117/179 (65.36%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKR-------RALQDVLEDDLQEE----------TRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FG + V  EEK   V  VF SVAK YD+MND+MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L+ V S  +       RA Q++  +++ +E          +R+ +CDIN  ML VGK++AL +GY+   L WV GDAE L F+D   D YTIAFGIRN THI++AL
Sbjct:   52 THFGSETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVMCDINKEMLKVGKQKALAQGYR-AGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQAL 229          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_RAT (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Rattus norvegicus GN=Coq5 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38
Identity = 91/179 (50.84%), Postives = 111/179 (62.01%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNS----IKRRALQDVLEDDLQEETRIY-------------VCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF+ V  +EK   V  VF SVA+ YDLMND+MS G+HR WKD L+ K++P PG + LDVAGGTGD+AFR L  V +     +RR L+       +E  R Y             VCDIN  ML VGK++AL RG+    L WV GDAE L F+D   D YTIAFGIRN THI++AL
Sbjct:   52 THFGFETVSEKEKGGKVYQVFQSVARKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDVAGGTGDIAFRFLSYVQTQHERKQRRQLRTRQNLSWEEIARKYQSKEDPLGGSLVMVCDINREMLKVGKQKALARGH-TAGLAWVLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRAL 229          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_DICDI (Ubiquinone biosynthesis methyltransferase coq5, mitochondrial OS=Dictyostelium discoideum GN=coq5 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38
Identity = 83/175 (47.43%), Postives = 113/175 (64.57%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILD----------TVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQ---SLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGFK V  E+K  +V +VF SV+ +YDLMND+MS G+HRLWKD L++ LNP PG   LDVAGGTGD++FR LD           +N       + +    L     ++  DIN +MLN GKKR L +GY DQ   S+ WV+G++E L F+D+T + YT++FGIRN T+I++ L
Sbjct:   44 THFGFKTVNKEDKESMVKDVFDSVSSSYDLMNDVMSMGIHRLWKDELINTLNPTPGSHLLDVAGGTGDISFRFLDKIKTSPNYFPNINKSNNGGGEVLKSSSLPSSATVF--DINQSMLNEGKKRGLNKGYTDQSDPSIDWVQGNSEQLPFKDNTFNCYTVSFGIRNCTNIDQVL 216          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_MOUSE (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Mus musculus GN=Coq5 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.050e-37
Identity = 87/179 (48.60%), Postives = 111/179 (62.01%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL-----------------EDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF+ V   EK   V  VF +VAK YDLMND+MS G+HR WKD L+ K++P PG + LD+AGGTGD+AFR L  V +  +R  +  L                 E+D    +   VCDIN  ML VGK++AL++G+    L WV GDAE L F+D + D YTIAFGIRN THI++AL
Sbjct:   52 THFGFETVSEGEKGSKVYQVFENVAKKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDMAGGTGDIAFRFLSYVQAQHQRRQRRQLRTQQNLSWEEIAKKYQNEEDSLGGSLATVCDINREMLKVGKQKALDQGH-TAGLAWVLGDAEELPFDDDSFDVYTIAFGIRNVTHIDQAL 229          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_CHICK (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Gallus gallus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37
Identity = 86/180 (47.78%), Postives = 110/180 (61.11%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL-----------EDDLQEE-------TRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF+ V   E+ + +  VF +VA+ YD+MND MS G+HR+WKD LV K+NP PG   +DVAGGTGD+AFR L+ V S++ R LQ  L               QEE       +++ VCDIN  ML  GK++A   GY  + L WV G+AE L F+D   D YTIAFGIRN T I+ AL
Sbjct:   35 THFGFQNVSEAERREKIYQVFENVAEKYDVMNDSMSLGIHRVWKDILVHKMNPSPGTLLVDVAGGTGDIAFRFLNYVRSVRERQLQQKLRHHQNLSWQEISKSYQEEKSNPLGDSQVVVCDINKEMLKAGKQKAQHLGY-SEGLSWVLGNAEELHFDDDKFDVYTIAFGIRNVTRIDLAL 213          
The following BLAST results are available for this feature:
BLAST of FC923352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
COQ5_ARATH1.358e-6970.83Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_ORYSJ3.346e-6875.90Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_HUMAN1.325e-4051.40Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_DANRE1.913e-3950.00Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_BOVIN1.913e-3949.16Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_PONAB3.263e-3950.28Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_RAT2.763e-3850.84Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_DICDI2.763e-3847.43Ubiquinone biosynthesis methyltransferase coq5, mi... [more]
COQ5_MOUSE1.050e-3748.60Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
COQ5_CHICK5.210e-3747.78Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]

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Properties
Property NameValue
Genbank descriptionC31704B04EF StrClemenN Citrus clementina cDNA clone C31704B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923352 ID=FC923352; Name=FC923352; organism=Citrus clementina; type=EST; length=698bp
GAAGAACGAGGGAGAGTTGGAGAAGCGAATATTATTAGAACAGAGAGTGT
ACAGTTTTATTGGGCGCCCGTTACTGTTTCAAGGTTTTCAGCATCGATTG
CATTGTTAGAAAGTTGTTGAAGCCATGGCAGTGCGGGTGGTGACGAGGAA
TTTGGGGAGTAGACTCTTACCGATGCTCTCTTCCACTTCTTTACTGCATT
CACATGCTACAAGCTTCGGGTTCAAAGAAGTACCGGCAGAAGAAAAAAGT
CAATTGGTTAGCAATGTTTTCAGCAGTGTTGCTAAAAATTATGATCTCAT
GAATGATTTGATGAGTGGTGGATTGCATAGATTGTGGAAGGATAGACTTG
TTTCCAAGTTGAATCCATTTCCGGGAATGAAGCACCTTGATGTTGCTGGT
GGAACAGGGGATGTTGCTTTCAGGATTTTAGACACTGTAAATAGCATCAA
ACGAAGAGCACTCCAGGATGTTCTTGAAGATGATTTACAGGAGGAAACTC
GGATATATGTTTGTGACATCAACCCAAACATGCTAAATGTTGGTAAAAAG
CGTGCTTTAGAGAGAGGTTACCAGGACCAATCACTTTTGTGGGTGGAAGG
AGATGCAGAAGCCTTGTGCTTTGAAGACAGTACTATGGATGGTTACACNA
TTGCCTTCGGAATTAGGAATGGTACTCATATTGAGAAGGCTCTAGCTG
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