FC923357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 73/105 (69.52%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MPIRNIA+G P EAT PDAL+AALAEFISTLIFV AG GSGMAFNKLT NGA TPS NISGGHVNPAVTFGAF+GGNI+LLRGIL Sbjct: 1 MPIRNIAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGIL 105
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32 Identity = 69/105 (65.71%), Postives = 78/105 (74.29%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MPIRNIAVG P+EATHPD L+A LAEFIST IFVFAG GSG+A+NKLT++GA TP+ NISGGHVNPAVTFGAFVGGNI+LLRGI+ Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIV 105
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.233e-30 Identity = 68/105 (64.76%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MPIRNIAVG +E HP AL+AALAEFISTLIFVFAG+GSGMAF+KLT GA TP+ NISGGHVNPAVTFGAFVGGNI+L RG+L Sbjct: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLL 105
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 5.514e-30 Identity = 68/105 (64.76%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MPIRNIAVG P+EATHPD L+A LAEFIST IFVFAG GSG+A+NKLT++GA TP+ NISGGHVNPAV FGAFVGGNI+LLRGI+ Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIV 104
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.040e-28 Identity = 67/106 (63.21%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 73 MPIRNIAVGHPREAT-HPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MP RNIA+G +E HP+ALRAALAEFISTLIFVFAG GSG+AFNK+T NGA TPS NISGGHVNPAVTFG +GGNI+LLRGIL Sbjct: 1 MPTRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGIL 106
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.161e-28 Identity = 63/105 (60.00%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MP+ IAVG P E +HPD +AA+AEFISTLIFVFAG GSGMAF+KLT GA TP+ NISGGHVNPAVTFGAFVGGNISLL+ ++ Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALV 105
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.502e-27 Identity = 63/105 (60.00%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MPI IA+G +E HP AL+AA AEFISTLIFVFAG+GSGMAF+KLT G TP+ NISGGHVNPAVTFGAFVGGNI+L RG+L Sbjct: 1 MPINRIALGSHQEVYHPGALKAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLL 105
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.345e-27 Identity = 61/105 (58.10%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MP+ IAVG P E +HPD +AA+AEFIS LIFVFAG GSGMAF+KLT G TPS NISGGHVNPAVTFGAFVGGNISL++ ++ Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVV 105
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.453e-27 Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 73 MPIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGIL 387 MPI IA+G P EA+ PDA+RAA AEF S +IFVFAG+GSGMA+ KLT +G TP+ N+SGGHVNPAVTFGAF+GGNI+LLR IL Sbjct: 1 MPINRIAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAIL 105
BLAST of FC923357 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.033e-20 Identity = 51/106 (48.11%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 82 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKL-----THNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGI 384 R G EATHPD++RA LAEF+ST +FVFAGEGS +A +KL H G NTP N+SGGHVNPAVTF A +GG IS++R I Sbjct: 7 RAYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAI 112 The following BLAST results are available for this feature:
BLAST of FC923357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923357 ID=FC923357; Name=FC923357; organism=Citrus clementina; type=EST; length=389bpback to top |