FC923358

Overview
NameFC923358
Unique NameFC923358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15364 contig Ccv1_Contig15364:4..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32
Identity = 69/134 (51.49%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  301 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C            S+I G E    ++T +YLA SASAE  A
Sbjct:   38 RSRHLAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLASSASAEFFA 171          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32
Identity = 69/134 (51.49%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  301 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C            S+I G E    ++T +YLA SASAE  A
Sbjct:   37 RSRHLAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLAASASAEFFA 170          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31
Identity = 68/130 (52.31%), Postives = 80/130 (61.54%), Query Frame = 1
Query:  313 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C            S++ G E    ++T +YLA SASAE  A
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFA 175          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 1
Query:  319 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G R   +GW PTLLGYSAQG              +D+ G E A  Y+T +YLA SASAE  A
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPTLLGYSAQGLGKFGFYEIFKNVYADMLGEENAYLYRTSLYLAASASAEFFA 154          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 66/133 (49.62%), Postives = 81/133 (60.90%), Query Frame = 1
Query:  304 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G RG  +GW PT +GYS QG C            S++ G E A  ++T +YLA SASAE  A
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPTFIGYSLQGLCKFGFYEVFKVLYSNMLGEENAYLWRTSLYLAASASAEFFA 176          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.677e-30
Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 1
Query:  304 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C            S++ G E    ++T +YLA SASAE  A
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFA 176          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28
Identity = 58/119 (48.74%), Postives = 78/119 (65.55%), Query Frame = 1
Query:  346 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G+RG  +GW PT +GYS QG C            +++   E A  Y+T +YLA SASAE  A
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPTFIGYSLQGLCKFGLYEVFKVQYNNMLDEETAYTYRTFVYLAASASAEFFA 160          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.491e-27
Identity = 56/127 (44.09%), Postives = 83/127 (65.35%), Query Frame = 1
Query:  325 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G+RG + G +PTL+GYS QG              S + G + A +Y+T IYLA SASAE +A
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASASAELLA 134          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  331 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G +  + G+  T +GYS QGA             S    P         +YL  SA+AE +A
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQGAGKYGGYEYFKHLYSSWLSP------GVTVYLMASATAEFLA 123          
BLAST of FC923358 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  355 SPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEXIA 702
            +P+ +     GG LSC +TH+ V PLD+VK  +Q +P KY  + +GF  ++KEQG  G  +G  PT +GY+ QG              +D  G E A +++  I+LA SA+AE IA
Sbjct:    6 TPSLFLKYGFGGALSCSITHSLVVPLDVVKTLLQTNPGKYTGMMNGFSTVIKEQGPSGLLQGLGPTAVGYALQGFLKFGFYEVFKKTYADAVG-EKADQFRIPIWLAASATAEVIA 120          
The following BLAST results are available for this feature:
BLAST of FC923358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_MOUSE3.929e-3251.49Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_RAT5.131e-3251.49Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_PONAB1.493e-3152.31Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_CAEEL1.651e-3049.22Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_BOVIN1.651e-3049.62Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_HUMAN3.677e-3048.87Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_CHOFU2.635e-2848.74Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO6.491e-2744.09Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST3.814e-1938.71Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MCFN_DICDI1.148e-1538.79Mitochondrial substrate carrier family protein N O... [more]

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Properties
Property NameValue
Genbank descriptionC31704B10EF StrClemenN Citrus clementina cDNA clone C31704B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923358 ID=FC923358; Name=FC923358; organism=Citrus clementina; type=EST; length=702bp
GAAAAGCGGAATTGCTTTGCCCGGGTTCTAACAAATTGGCAGCGAGAGAC
AGGAGGAGGAGAAGAGAAAGAGAAAATTAGAAGAATTCTCTCTGTCTCGC
TCTTTTTCTCTATAATTCAATCAAGCTTTTTACTCTCAAAATCAAATTTC
AAAAATTCCGAAATGGCCCTCACAGAATCTTATAGGAAAAACTCTCTGAT
ACCAAGCTACCTCTACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCTT
TCAATGGAGCGGCAGCAGCCGCCACGTCGCCGGCTACTCCATCCACGGCG
AGGAGGAGCTTCGTTGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGAT
GTACTCCCCTGCATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCT
GCGGTCTCACTCACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAAT
ATGCAGATTGATCCTGTTAAGTACAAAAGCATATCATCTGGTTTTGGAGT
TTTGCTCAAGGAACAGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTA
CCTTGCTTGGTTACAGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACGAG
TTCTTCAAGAAGTACTACTCTGACATTGCTGGTCCAGAGTATGCTGCTAA
GTACAAGACTTTAATCTACCTTGCTGGCTCTGCTTCTGCTGAGNTCATTG
CT
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