FC923366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_DANRE (Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21 Identity = 67/209 (32.06%), Postives = 109/209 (52.15%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY---------GQLNSPQ-LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S P D+ + +T ++ T ES AA+W++P + N+PQ LE + LD AH G + CVLW G +++S+ E ++ LW L S+ A + S + G L + + G W P H+ +A +++++ WDLR Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLKFDNQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYNKTSESRVLTCAAVWRMPPEWESGNHESPDDSSNNPQTLELLCHLDNSAH-GSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKF-TAGKWSPHHNCTQLATANDTAIRGWDLR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_DICDI (Protein tssc1 homolog OS=Dictyostelium discoideum GN=tssc1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.609e-21 Identity = 64/212 (30.19%), Postives = 107/212 (50.47%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFST----------------------GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS-LDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR 640 YGL + R +S + A+ D FL GT +L+EENE+ LL + G + C +F HP EI ++SCPFD +F +V++T + +++W+I E + +E + L H G I +L SG ++ ++S+D+ NI LWS +D N+ + + G L LS G+ +P+ N +A + +++ WD R Sbjct: 14 YGLSQKTRALSHITAEADVNRFLVGTTALREENEIALL-EAKEGEGVRCLSIFPHPKEIHSITSCPFDSSLFFSVYNTSGGGNNNSNNTNNNDNTNNNTNNNDFKSSLWRINE-----SMDSIEELFELKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWSKIDDQNEPTVI---KQFGNLSKLSVGSINPNISNQLATANDVNIKGWDFR 216
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_XENTR (Protein TSSC1 OS=Xenopus tropicalis GN=tssc1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.777e-20 Identity = 65/209 (31.10%), Postives = 106/209 (50.72%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG----AAIWQIP-ELYG---------QLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW +S+ P D+ + +T ++ AA+W+IP EL G N+ LE + LD AH G + CV W G KL+S+ + + +W L S+ + + S + G L + S G W P H+ VA +++++ WD+R Sbjct: 9 YGLEFQARALAAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNILLHHAGEIWQISASPADRNVLATCYNKISDSKVLTCAAVWRIPKELQGGNHESPDDTSSNAQALELLCHLDNTAH-GNMACVTWEPLGDGKKLLSLADNYLMIWDLQESSTKSVLSSSVTLEGKGQLRFTS-GKWSPHHNCTQVATANDTAIRGWDIR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_RAT (Protein TSSC1 OS=Rattus norvegicus GN=Tssc1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.932e-20 Identity = 65/208 (31.25%), Postives = 107/208 (51.44%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD-AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP+ LE + LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + S G W P H+ VA +++++ WD R Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTSDSRVQACAAVWRMPKELESGSHESPEDPASTAQTLELLCHLDNGAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSAALEGRGQLKFTS-GRWSPHHNCTQVATASDTTLRGWDTR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_XENLA (Protein TSSC1 OS=Xenopus laevis GN=tssc1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.442e-20 Identity = 64/209 (30.62%), Postives = 106/209 (50.72%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS----TGESYGAAIWQIP-ELYG---------QLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW + + P D+ + +T ++ + AA+W+IP EL G N+ LE + LD AH G + CV W G KL+S+ + + +W L S+ + + S + G L + S G W P H+ VA +++++ WD+R Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNVLLHHAGEIWQIGASPADRNVLATCYNKISDSKVMTCAAVWRIPKELQGGNHESPDDTSSNAQSLELLCHLDSTAH-GNMACVTWEPLGDGKKLLSLADNYLLIWDLQESSTKSVLSSSATLEGKGQLRFTS-GKWSPHHNCTQVATANDTAIRGWDIR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_HUMAN (Protein TSSC1 OS=Homo sapiens GN=TSSC1 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.442e-20 Identity = 68/209 (32.54%), Postives = 108/209 (51.67%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD R Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLTTCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_MOUSE (Protein TSSC1 OS=Mus musculus GN=Tssc1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.874e-19 Identity = 64/208 (30.77%), Postives = 107/208 (51.44%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD-AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD + G + CV+W G K++S+ + +I LW L S+ A + S + G L + + G W P H+ VA +++++ WD R Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTTDSRVQACAAVWRMPKELESGSHESPDDPASTAQTLELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKF-TAGRWSPHHNCTQVATASDTTLRGWDTR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_GECJA (Protein TSSC1 OS=Gecko japonicus GN=TSSC1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19 Identity = 65/209 (31.10%), Postives = 107/209 (51.20%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY----------GQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T +S T +S AA+W++P+ N+ LE + LD AH G + VLW G KL+S+ + ++ LW L S+ A + + + G L + S G W P H+ VA +++++ WD+R Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADKGVLATCYSKTSDSKVMTCAAVWRMPKELESGSHESPDDSSSNAQTLELLCHLDNTAH-GNMAGVLWEPMGDGKKLISLADNHLLLWDLQESSSKAVLSNSAALEGKGQLKFTS-GRWSPHHNCTQVATANDTAIRGWDIR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_MACFA (Protein TSSC1 OS=Macaca fascicularis GN=TSSC1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.197e-19 Identity = 67/209 (32.06%), Postives = 107/209 (51.20%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD R Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLATCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-SNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTR 215
BLAST of FC923366 vs. ExPASy Swiss-Prot
Match: TSSC1_PONAB (Protein TSSC1 OS=Pongo abelii GN=TSSC1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.291e-17 Identity = 68/236 (28.81%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 74 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLWLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-------TGESYG------------------------AAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLR 640 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ + +S+G AA+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD R Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADRGVLATCYNRTFCCVLSLDSFGALGKSSAQLFIALATSSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTR 242 The following BLAST results are available for this feature:
BLAST of FC923366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923366 ID=FC923366; Name=FC923366; organism=Citrus clementina; type=EST; length=642bpback to top |