FC923378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_ARATH (NEDD8-activating enzyme E1 catalytic subunit OS=Arabidopsis thaliana GN=ECR1 PE=1 SV=2) HSP 1 Score: 280.411 bits (716), Expect = 5.578e-75 Identity = 137/166 (82.53%), Postives = 147/166 (88.55%), Query Frame = 2 Query: 155 GNLVGPTFEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 GNLV P F PG LRDD+++Y RILV+GAGGLGCELLKDLALSGF+NLEVIDMDRIEV+NLNRQFLFR+EDVGKPKAEVAAKRVMERVSGV IVPHF RIEDK+I FYNDFNII LGLDSIEAR YIN VAC FLEY DD P+ ET +PMVDGGTEGFKGH RVI Sbjct: 26 GNLVDPGFVPGPGLRDDIRDYVRILVIGAGGLGCELLKDLALSGFRNLEVIDMDRIEVTNLNRQFLFRIEDVGKPKAEVAAKRVMERVSGVEIVPHFSRIEDKEIEFYNDFNIIALGLDSIEARKYINGVACGFLEYNEDDTPKRETIKPMVDGGTEGFKGHARVI 191
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_CAEEL (NEDD8-activating enzyme E1 catalytic subunit OS=Caenorhabditis elegans GN=uba-3 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.408e-48 Identity = 100/161 (62.11%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 170 PTFEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 P F PG E + LQ +ILV+GAGGLGCELLK+LALSGF+ +EVIDMD I+VSNLNRQFLFR DVGK KAEVAA V +RV G + H CRIEDK FY F+II+ GLDSI AR +IN + C + D KP E T PM+DGGTEGFKG+ RVI Sbjct: 28 PWFVPGPENFEALQN-TKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESDVGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSIIICGLDSIPARRWINGMLCDLVLEMADGKPDENTIIPMIDGGTEGFKGNARVI 187
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_DICDI (NEDD8-activating enzyme E1 catalytic subunit OS=Dictyostelium discoideum GN=uba3 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 8.393e-47 Identity = 91/170 (53.53%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 155 GNLVGPTFEPGAE----LRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 G P+FEP + + + LQ ++LV+GAGGLGCE+LK+LALSGF+N++VIDMD I++SNLNRQFLFR +DVGK KAEVAA + R++G N+ PH CRI+DKD +Y F I++ GLDSIEAR +IN + + + +T P+VDGGTEGFKG RVI Sbjct: 25 GPFASPSFEPDTKASPNIMNGLQNDFKVLVIGAGGLGCEILKNLALSGFRNIDVIDMDTIDISNLNRQFLFRRKDVGKSKAEVAAAFINSRITGCNVTPHKCRIQDKDEDYYRQFKIVIAGLDSIEARRWINGLLVNLVVVNDSGDIEPDTIIPLVDGGTEGFKGQARVI 194
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_RAT (NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus GN=Uba3 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.440e-46 Identity = 95/167 (56.89%), Postives = 121/167 (72.46%), Query Frame = 2 Query: 152 AGNLVGPTFEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 +G P FEP E L + ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +DVG+PKAEVAA+ + +RV N+VPHF +I+D + +FY F+IIV GLDSI AR +IN + S L YE D + P++DGGTEGFKG+ RVI Sbjct: 48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVI 213
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_MOUSE (NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus GN=Uba3 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.440e-46 Identity = 95/167 (56.89%), Postives = 121/167 (72.46%), Query Frame = 2 Query: 152 AGNLVGPTFEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 +G P FEP E L + ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +DVG+PKAEVAA+ + +RV N+VPHF +I+D + +FY F+IIV GLDSI AR +IN + S L YE D + P++DGGTEGFKG+ RVI Sbjct: 48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVI 213
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_PONAB (NEDD8-activating enzyme E1 catalytic subunit OS=Pongo abelii GN=UBA3 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.105e-46 Identity = 94/167 (56.29%), Postives = 121/167 (72.46%), Query Frame = 2 Query: 152 AGNLVGPTFEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 +G P FEP E L + ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +D+G+PKAEVAA+ + +RV N+VPHF +I+D + +FY F+IIV GLDSI AR +IN + S L YE D + P++DGGTEGFKG+ RVI Sbjct: 48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVI 213
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_HUMAN (NEDD8-activating enzyme E1 catalytic subunit OS=Homo sapiens GN=UBA3 PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.105e-46 Identity = 94/167 (56.29%), Postives = 121/167 (72.46%), Query Frame = 2 Query: 152 AGNLVGPTFEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 +G P FEP E L + ++LV+GAGGLGCELLK+LALSGF+ + VIDMD I+VSNLNRQFLFR +D+G+PKAEVAA+ + +RV N+VPHF +I+D + +FY F+IIV GLDSI AR +IN + S L YE D + P++DGGTEGFKG+ RVI Sbjct: 48 SGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYE-DGVLDPSSIVPLIDGGTEGFKGNARVI 213
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_DANRE (NEDD8-activating enzyme E1 catalytic subunit OS=Danio rerio GN=uba3 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.583e-45 Identity = 94/166 (56.63%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 155 GNLVGPTFEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 G P FE E L + +ILV+GAGGLGCELLKDLALSGF+++ V+DMD I+VSNLNRQFLFR +DVG+PKAEVAA V +RV G ++VPHF +I+D D +FY F+I+V GLDS+ AR ++N + S L YE D + P++DGGTEGFKG+ RVI Sbjct: 48 GPFTHPDFEASTESLQFLLDTCKILVIGAGGLGCELLKDLALSGFRHIHVVDMDTIDVSNLNRQFLFRPKDVGRPKAEVAADFVNDRVPGCSVVPHFKKIQDLDETFYRQFHIVVCGLDSVIARRWMNGMLLSLLIYE-DGVLDPSSIIPLIDGGTEGFKGNARVI 212
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_DROME (NEDD8-activating enzyme E1 catalytic subunit OS=Drosophila melanogaster GN=CG13343 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.301e-43 Identity = 89/159 (55.97%), Postives = 110/159 (69.18%), Query Frame = 2 Query: 176 FEPGAELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 F +E + LQ ++L++GAGGLGCELLKDLAL GF NL VIDMD IE+SNLNRQFLFR D+G KAE AA+ + RV + PHF +I+D D SFY F+++V GLDSI AR +IN + S L YE D + PM+DGGTEGFKG+ RVI Sbjct: 35 FAASSENLEFLQTKCQVLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNARVI 193
BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: UBA3_SCHPO (NEDD8-activating enzyme E1 catalytic subunit OS=Schizosaccharomyces pombe GN=uba3 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.291e-36 Identity = 74/145 (51.03%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 218 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETNQPMVDGGTEGFKGHGRVI 652 ++IL++GAGGLGCE+LKDLALSGF++L VIDMD I+++NLNRQFLF ++ +PKA VAA +M+R+ + P + +I+DK I FY +F +I+ GLDS+EAR +IN+ + +T D P+VDGG+EG KG RVI Sbjct: 45 SKILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNRQFLFNESNIDEPKANVAASMIMKRIPSTVVTPFYGKIQDKTIEFYKEFKLIICGLDSVEARRWINSTLVAIA--KTGDL------IPLVDGGSEGLKGQARVI 181 The following BLAST results are available for this feature:
BLAST of FC923378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923378 ID=FC923378; Name=FC923378; organism=Citrus clementina; type=EST; length=654bpback to top |