FC923386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923386 vs. ExPASy Swiss-Prot
Match: U4974_VITVI (UPF0497 membrane protein 4 OS=Vitis vinifera GN=GSVIVT00019813001 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17 Identity = 46/112 (41.07%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 210 KQNKVVPLKIIPTLPPVNVAVTAKWQYSSAFVFNVVSNXXXXXXXXXXXXXXXXDKNGNKGXXXXXXXXXXXXXXXXFSXXXXXXXXXXXXYQGNSHVQWRKVCDVFGEFCS 545 KQ KVV L+++PTLPP++V VTAKW+Y SAFV+ VVSN + GNKG FS Y+GNS V+W KVC+VFG+FC+ Sbjct: 53 KQTKVVSLQLLPTLPPMDVPVTAKWRYLSAFVYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLMGYEGNSRVRWGKVCNVFGKFCN 164
BLAST of FC923386 vs. ExPASy Swiss-Prot
Match: U497B_SOYBN (UPF0497 membrane protein 11 OS=Glycine max PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13 Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 3 Query: 210 KQNKVVPLKIIPTLPPVNVAVTAKWQYSSAFVFNVVSNXXXXXXXXXXXXXXXXDKNGNKGXXXXXXXXXXXXXXXXFSXXXXXXXXXXXXYQGNSHVQWRKVCDVFGEFC 542 KQ K+VP+++ + PP+NV +TAKW SAFV+ +V+N ++ +KG FS Y+GNSHV W KVC+VFG+FC Sbjct: 46 KQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFLVTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGNSHVNWNKVCNVFGKFC 156
BLAST of FC923386 vs. ExPASy Swiss-Prot
Match: U497A_SOYBN (UPF0497 membrane protein 10 OS=Glycine max PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13 Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 3 Query: 210 KQNKVVPLKIIPTLPPVNVAVTAKWQYSSAFVFNVVSNXXXXXXXXXXXXXXXXDKNGNKGXXXXXXXXXXXXXXXXFSXXXXXXXXXXXXYQGNSHVQWRKVCDVFGEFC 542 KQ KVVP+++ +LPP++V +TAKW SA V+ +V+N ++ +KG FS Y+GNSHV W KVC+VFG+FC Sbjct: 45 KQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFLVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGNSHVNWNKVCNVFGKFC 155
BLAST of FC923386 vs. ExPASy Swiss-Prot
Match: U4976_VITVI (UPF0497 membrane protein 6 OS=Vitis vinifera GN=GSVIVT00023588001 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 41/114 (35.96%), Postives = 51/114 (44.74%), Query Frame = 3 Query: 210 KQNKVVPLKIIPTLPPVNVAVTAKWQYSSAFVFNVVSN-XXXXXXXXXXXXXXXXDKNGNKGXXXXXXXXXXXXXXXXFSXXXXXXXXXXXXYQGNSHVQWRKVCDVFGEFCSH 548 KQ K++PL +I TLP ++V VTAKW SAFV+ VVSN + G G FS GNSHV+W+KVC+VF FC H Sbjct: 56 KQTKIIPLTLIKTLPSLHVPVTAKWSDMSAFVYLVVSNAIACSYAAISLVLVTMLGRRGKGGRVLAVIVLDLHMVGLLFSANGAATAVGVLGQYGNSHVEWKKVCNVFDSFCHH 169
BLAST of FC923386 vs. ExPASy Swiss-Prot
Match: U497C_RICCO (UPF0497 membrane protein 12 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.047e-11 Identity = 39/111 (35.14%), Postives = 51/111 (45.95%), Query Frame = 3 Query: 213 QNKVVPLKIIPTLPPVNVAVTAKWQYSSAFVFNVVSNXXXXXXXXXXXXXXXXDKNGNKGXXXXXXXXXXXXXXXXFSXXXXXXXXXXXXYQGNSHVQWRKVCDVFGEFCS 545 Q + VP+++ ++PP+ V V AKW Y SAFVF VVSN G K FS Y+GNSHV+W KVC+VFG+FC+ Sbjct: 53 QTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNAIACSYAAISVMLSFC---GKKSMVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVKWNKVCNVFGKFCN 160 The following BLAST results are available for this feature:
BLAST of FC923386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923386 ID=FC923386; Name=FC923386; organism=Citrus clementina; type=EST; length=628bpback to top |