FC923421

Overview
NameFC923421
Unique NameFC923421
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14463 contig Ccv1_Contig14463:1..489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: BUD32_DICDI (Probable serine/threonine-protein kinase BUD32 homolog OS=Dictyostelium discoideum GN=bud32 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  162 ILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQI 488
            ILI QGAEA+ +E+   G +C+VKERFSK YRHP LD KI+ KR+  E R + K ++ G+  P LY VD   + +  E+++G +VK    +       + Q+E I  ++
Sbjct:   39 ILISQGAEAKTYETDLYGLKCIVKERFSKAYRHPILDQKISSKRILQEVRSLNKCKKKGIQVPSLYLVDIGNNRIYMEFIKGETVKHYLYKNQESTQHQNQIESIMKEL 147          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: PRPK_HUMAN (TP53-regulating kinase OS=Homo sapiens GN=TP53RK PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 3
Query:  159 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEG 407
            L L+KQGAEARVF   F GR  V+K RF K YRHP+L++++  +R   EAR + + RR G+S PV++ VD   + L  E +EG
Sbjct:   36 LELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEG 118          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: PRPK_MOUSE (TP53-regulating kinase OS=Mus musculus GN=Tp53rk PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 3
Query:  159 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVE 404
            L L++QGAEARVF   F GR  VVK RF K YRHP L++++  +R   EAR + + RR G++ PV++ VD   + L  E +E
Sbjct:   27 LELVQQGAEARVFRGRFQGRAAVVKHRFPKSYRHPELEARLGRRRTVQEARALLRCRRAGIAAPVVFFVDYASNCLYMEEIE 108          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: GCP_METTH (Putative O-sialoglycoprotein endopeptidase OS=Methanobacterium thermoautotrophicum GN=gcp PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.396e-14
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 3
Query:  165 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKD 422
            ++ +GAEA ++   ++GR C++KER SK YR P +D K+   R   EAR + +A+  GV TPVL+ VDP    +  E V G   +D
Sbjct:  339 ILAKGAEANIYRGQWIGRPCIIKERISKGYRIPEIDQKLRSSRTRREARLINQAKGAGVHTPVLFDVDPDGGVMVMEEVRGTPFRD 424          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: BUD32_SCHPO (Serine/threonine-protein kinase bud32 OS=Schizosaccharomyces pombe GN=bud32 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.146e-13
Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 3
Query:  129 EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLE 434
            +I    ++  L ++KQGAEA   ++ F  G  C++K R +K++RHP LD K++ KR   EAR + K   +G+  P+LY +D  +  +  E+++GP V+D   E
Sbjct:   13 DIYREIKEKKLTVVKQGAEAITIKTEFYPGEVCLLKCRPAKRWRHPILDQKLSRKRCLVEARLLAKCHYVGIKCPMLYFIDANRGQIYMEWIDGPCVRDYIRE 115          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: BUD32_CHAGB (Serine/threonine-protein kinase BUD32 OS=Chaetomium globosum GN=BUD32 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 3
Query:  165 LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVK 419
            LI QGAE R++++T +   R C +K R  K YRHP LD+++T  RL++EA+ + +  R GV  P +YA+DP    +  E++EG  V+
Sbjct:   25 LITQGAEGRLYKTTHLTRDRPCALKYRPPKPYRHPVLDARLTKARLSSEAKVLERCWREGVPVPAVYAMDPAAGWMMMEWIEGIPVR 111          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: GCP_NATPD (Putative O-sialoglycoprotein endopeptidase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.584e-12
Identity = 41/94 (43.62%), Postives = 53/94 (56.38%), Query Frame = 3
Query:  171 KQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 452
            +QGAEA V      GR  V K R  K YRHP LDS++  +R  +EAR  ++ARR GV TPV+Y VDP    L F+YV    +K    E  +  +
Sbjct:  345 RQGAEAVVDIDADGGR--VTKRRLEKAYRHPVLDSRLRSQRTRSEARLTSEARRQGVPTPVVYDVDPDAGRLVFQYVGDADLKTALSESAVRDV 436          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: GCP_METS3 (Putative O-sialoglycoprotein endopeptidase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=gcp PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.819e-12
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 3
Query:  165 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDI 425
            LI +GAE+ + +S+++G+  V+K R  K YR   +DSKI   R   EA+ ++  ++ GV TPVLY VD    ++  E +EG  +K++
Sbjct:  341 LIAKGAESDIIKSSYLGKNAVLKSRIPKAYRIAEIDSKIRKSRTKLEAKLLSDVKKSGVITPVLYDVDLENKSILMEAIEGKMLKEV 427          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: BUD32_GIBZE (Serine/threonine-protein kinase BUD32 OS=Gibberella zeae GN=BUD32 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.819e-12
Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 3
Query:  162 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVK 419
            ILI QGAE R++++T++     C +K R  K +RHP LD ++T  R+ +EAR + K RR GV  P +YAVD     L  E+V G  V+
Sbjct:   34 ILITQGAEGRLYKTTYLLPDIPCALKYRPPKPWRHPILDQRLTKHRILSEARILAKCRRDGVRVPAVYAVDESAGWLMLEWVSGGPVR 121          
BLAST of FC923421 vs. ExPASy Swiss-Prot
Match: GCP_HALWD (Putative O-sialoglycoprotein endopeptidase OS=Haloquadratum walsbyi (strain DSM 16790) GN=gcp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.880e-11
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 3
Query:  225 VVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV 401
            VVK R  K YRHP LD ++  +R  AEAR  + ARRLGV TP+++  DP   TL FEYV
Sbjct:  361 VVKRRVEKSYRHPKLDRRLRAERTRAEARLTSAARRLGVPTPLIFDADPETGTLVFEYV 419          
The following BLAST results are available for this feature:
BLAST of FC923421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BUD32_DICDI7.301e-1840.37Probable serine/threonine-protein kinase BUD32 hom... [more]
PRPK_HUMAN5.232e-1648.19TP53-regulating kinase OS=Homo sapiens GN=TP53RK P... [more]
PRPK_MOUSE9.868e-1546.34TP53-regulating kinase OS=Mus musculus GN=Tp53rk P... [more]
GCP_METTH6.396e-1440.70Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
BUD32_SCHPO4.146e-1335.92Serine/threonine-protein kinase bud32 OS=Schizosac... [more]
BUD32_CHAGB1.575e-1241.38Serine/threonine-protein kinase BUD32 OS=Chaetomiu... [more]
GCP_NATPD4.584e-1243.62Putative O-sialoglycoprotein endopeptidase OS=Natr... [more]
GCP_METS37.819e-1237.93Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
BUD32_GIBZE7.819e-1243.18Serine/threonine-protein kinase BUD32 OS=Gibberell... [more]
GCP_HALWD3.880e-1154.24Putative O-sialoglycoprotein endopeptidase OS=Halo... [more]

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Properties
Property NameValue
Genbank descriptionC31704H02EF StrClemenN Citrus clementina cDNA clone C31704H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923421 ID=FC923421; Name=FC923421; organism=Citrus clementina; type=EST; length=489bp
GGAATTTCAAATTGAGCTTGTTCAAGCTTCTGTTTACTGCAAGAATCCGA
TTTGGTTCGTTATAGAAAGAGATGAAGTCGGATGCATCATTCGGGCTGCG
GTAAAGTACTGCCAAGTTGTTCAATATGGAGATTACAGCCAACAGTGAAG
ATGGATCGCTCATTCTCATAAAGCAAGGAGCTGAAGCTAGGGTTTTTGAG
TCAACTTTTGTGGGAAGGAGGTGTGTTGTCAAGGAGCGTTTCTCAAAGAA
ATATAGGCATCCATCTCTGGATTCAAAAATCACTCTCAAACGCCTGAATG
CGGAGGCTAGGTGCATGACCAAAGCTAGAAGACTTGGAGTTTCAACTCCG
GTGCTTTATGCTGTTGATCCTGTTCAGCATACACTGACATTTGAGTATGT
CGAGGGTCCTTCTGTCAAAGATATATTCCTTGAATTTGGTTTGCATGGTA
TCATGGAAGAGCAGTTGGAGGATATTGCATTGCAGATTG
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