FC923470

Overview
NameFC923470
Unique NameFC923470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: GT2_ARATH (Putative glycosyltransferase 2 OS=Arabidopsis thaliana GN=GT2 PE=2 SV=1)

HSP 1 Score: 471.855 bits (1213), Expect = 1.474e-132
Identity = 215/232 (92.67%), Postives = 224/232 (96.55%), Query Frame = 1
Query:    1 KPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFV 696
            KPRVLLVTGS+PKPCENPVGDHYLLKSIKNKIDYCR+HGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPE+EFLWWMDSDAMFTDMAFE+PWERYKD+NLVMHGW EMVYD+KNWIGLNTGSFLLRN QWALDLLD WAPMGPKGKIR++AGK+LTRELK RPVFEADDQSAMVYLL TQRD WG KVYLES YYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFV
Sbjct:  149 KPRVLLVTGSAPKPCENPVGDHYLLKSIKNKIDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMAFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNNQWALDLLDTWAPMGPKGKIREEAGKVLTRELKDRPVFEADDQSAMVYLLATQRDAWGNKVYLESGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFV 380          
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: XT1_ARATH (Xyloglucan 6-xylosyltransferase OS=Arabidopsis thaliana GN=XT1 PE=1 SV=1)

HSP 1 Score: 462.611 bits (1189), Expect = 8.944e-130
Identity = 210/232 (90.52%), Postives = 222/232 (95.69%), Query Frame = 1
Query:    1 KPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFV 696
            KPRVLLVTGS+PKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPE+EFLWWMDSDAMFTDM FE+PWERYKD+NLVMHGW EMVYD+KNWIGLNTGSFLLRN QW+LDLLDAWAPMGPKGKIR++AGK+LTRELK RP FEADDQSAMVYLL T+R+KWG KVYLES YYLHGYWGILVDRYEEMIEN+ PG GDHRWPLVTHFV
Sbjct:  148 KPRVLLVTGSAPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMVFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNSQWSLDLLDAWAPMGPKGKIREEAGKVLTRELKDRPAFEADDQSAMVYLLATEREKWGGKVYLESGYYLHGYWGILVDRYEEMIENHKPGFGDHRWPLVTHFV 379          
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: GT5_ARATH (Putative glycosyltransferase 5 OS=Arabidopsis thaliana GN=GT5 PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.706e-110
Identity = 171/232 (73.71%), Postives = 209/232 (90.09%), Query Frame = 1
Query:    1 KPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFV 696
            K R+LL+TGS PKPC+NP+GDHYLLKS+KNKIDYCR+HGIEI YNMA LD E+AG+WAKLP+IR+L+LSHPEVE++WWMDSDA+FTD+ F++P  RY+ HNLV+HG+ ++++D+K+WI LNTGSFLLRNCQW+LDLLDAWAPMGPKG IRD+AGK+LT  LKGRP FEADDQSA++YLL++Q+D W EKV++E+ YYLHG+W  LVDRYEEMIE YHPGLGD RWP VTHFV
Sbjct:  149 KARILLLTGSPPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDALFTDILFQIPLARYQKHNLVIHGYPDLLFDQKSWIALNTGSFLLRNCQWSLDLLDAWAPMGPKGPIRDEAGKVLTAYLKGRPAFEADDQSALIYLLLSQKDTWMEKVFVENQYYLHGFWEGLVDRYEEMIEKYHPGLGDERWPFVTHFV 380          
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: GT3_ARATH (Putative glycosyltransferase 3 OS=Arabidopsis thaliana GN=GT3 PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.343e-109
Identity = 168/232 (72.41%), Postives = 209/232 (90.09%), Query Frame = 1
Query:    1 KPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFV 696
            K +VLL+TGS PKPC+NP+GDHYLLKS+KNKIDYCRIHGIEI YNMA LD E+AG+WAKLP+IR+L+LSHPE+E++WWMDSDA+FTDM FE+P  RY++HNLV+HG+ ++++D+K+WI LNTGSFL RNCQW+LDLLDAWAPMGPKG IR++AGKILT  LKGRP FEADDQSA++YLL++Q++ W EKV++E+ YYLHG+W  LVD+YEEM+E YHPGLGD RWP +THFV
Sbjct:  148 KAKVLLLTGSPPKPCDNPIGDHYLLKSVKNKIDYCRIHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEIEWIWWMDSDALFTDMVFEIPLSRYENHNLVIHGYPDLLFDQKSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSQKETWMEKVFVENQYYLHGFWEGLVDKYEEMMEKYHPGLGDERWPFITHFV 379          
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: GT4_ARATH (Putative glycosyltransferase 4 OS=Arabidopsis thaliana GN=GT4 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.064e-106
Identity = 165/232 (71.12%), Postives = 207/232 (89.22%), Query Frame = 1
Query:    1 KPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFV 696
            K R+LL+TGSSP PC+ P+G++YLLK++KNKIDYCR+HGIEI YNMA LD E++G+W KLP+IR L+LSHPEVE++WWMDSDA+FTD+ FE+P  RY++HNLV+HG+ ++++++K+W+ LNTG FLLRNCQW+LDLLDAWAPMGPKGKIRD+ GKILT  LKGRP FEADDQSA++YLL++Q++KW EKVY+E+ YYLHG+W  LVDRYEEMIE YHPGLGD RWP VTHFV
Sbjct:  207 KARILLLTGSSPGPCDKPIGNYYLLKAVKNKIDYCRLHGIEIVYNMANLDEELSGYWTKLPMIRTLMLSHPEVEWIWWMDSDALFTDILFEIPLPRYENHNLVIHGYPDLLFNQKSWVALNTGIFLLRNCQWSLDLLDAWAPMGPKGKIRDETGKILTAYLKGRPAFEADDQSALIYLLLSQKEKWIEKVYVENQYYLHGFWEGLVDRYEEMIEKYHPGLGDERWPFVTHFV 438          
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: GMGT1_CYATE (Galactomannan galactosyltransferase 1 OS=Cyamopsis tetragonoloba GN=GMGT1 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.169e-67
Identity = 110/217 (50.69%), Postives = 155/217 (71.43%), Query Frame = 1
Query:    1 KPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLIT-QRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENY 648
            + ++LLVTGS PK C NP+GDH LL+  KNK+DYCR+H  +I YN ALL  +M  +WAK P+IR  +++HPEVE++WW+DSDA+FTDM F++P +RYK+HNLV+HGW+ +V    +W GLN G FL+RNCQW+L+ +D W  MGP+    +  G+ L    K + + ++DDQ+A+ YL+ T  +D W EK++LES YY  GYW  +V  YE + E Y
Sbjct:  117 RDKILLVTGSQPKRCHNPIGDHLLLRFFKNKVDYCRLHNYDIIYNNALLHPKMNSYWAKYPVIRAAMMAHPEVEWVWWVDSDAVFTDMEFKLPLKRYKNHNLVVHGWEGLVRLNHSWTGLNAGVFLIRNCQWSLEFMDVWVSMGPQTPEYEKWGERLRETFKDKVLPDSDDQTALAYLIATDNKDTWREKIFLESEYYFEGYWLEIVKTYENISERY 333          
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: GT7_ARATH (Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.007e-64
Identity = 104/214 (48.60%), Postives = 148/214 (69.16%), Query Frame = 1
Query:    7 RVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENY 648
            R ++VTGS   PC+NP+GDH LL+  KNK+DYCRIHG +IFY+ ALL  +M  +WAKLP ++  +++HPE E++WW+DSDA+FTDM F  PW RYK+HNLV+HGW  ++Y++++W  LN G FL+RNCQW+++L+D W  MGP        G+I     K +   E+DDQ+A++YLL   R+ +  K+YLE  +Y  GYW  +V     + E Y
Sbjct:  124 RTVMVTGSQSAPCKNPIGDHLLLRFFKNKVDYCRIHGHDIFYSNALLHPKMNSYWAKLPAVKAAMIAHPEAEWIWWVDSDALFTDMDFTPPWRRYKEHNLVVHGWPGVIYNDRSWTALNAGVFLIRNCQWSMELIDTWTGMGPVSPEYAKWGQIQRSIFKDKLFPESDDQTALLYLLYKHREVYYPKIYLEGDFYFEGYWLEIVPGLSNVTERY 337          
BLAST of FC923470 vs. ExPASy Swiss-Prot
Match: GT6_ARATH (Glycosyltransferase 6 OS=Arabidopsis thaliana GN=GT6 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.455e-63
Identity = 102/214 (47.66%), Postives = 149/214 (69.63%), Query Frame = 1
Query:    7 RVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENY 648
            R+++VTGS   PC+NP+GDH LL+  KNK+DY RIHG +IFY+ +LL  +M  +WAKLP+++  +L+HPE E++WW+DSDA+FTDM F+ P  RY+ HNLV+HGW  ++Y++++W  LN G FL+RNCQW++DL+D W  MGP        G I     K +   E+DDQ+A++YLL   ++ +  K+YLE+ YYL GYW  +   +  + E Y
Sbjct:  107 RIVMVTGSQSSPCKNPIGDHLLLRCFKNKVDYARIHGHDIFYSNSLLHPKMNSYWAKLPVVKAAMLAHPEAEWIWWVDSDAIFTDMEFKPPLHRYRQHNLVVHGWPNIIYEKQSWTALNAGVFLIRNCQWSMDLIDTWKSMGPVSPDYKKWGPIQRSIFKDKLFPESDDQTALIYLLYKHKELYYPKIYLEAEYYLQGYWIGVFGDFANVTERY 320          
The following BLAST results are available for this feature:
BLAST of FC923470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GT2_ARATH1.474e-13292.67Putative glycosyltransferase 2 OS=Arabidopsis thal... [more]
XT1_ARATH8.944e-13090.52Xyloglucan 6-xylosyltransferase OS=Arabidopsis tha... [more]
GT5_ARATH2.706e-11073.71Putative glycosyltransferase 5 OS=Arabidopsis thal... [more]
GT3_ARATH1.343e-10972.41Putative glycosyltransferase 3 OS=Arabidopsis thal... [more]
GT4_ARATH1.064e-10671.12Putative glycosyltransferase 4 OS=Arabidopsis thal... [more]
GMGT1_CYATE2.169e-6750.69Galactomannan galactosyltransferase 1 OS=Cyamopsis... [more]
GT7_ARATH1.007e-6448.60Putative glycosyltransferase 7 OS=Arabidopsis thal... [more]
GT6_ARATH1.455e-6347.66Glycosyltransferase 6 OS=Arabidopsis thaliana GN=G... [more]
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Properties
Property NameValue
Genbank descriptionC31705D08EF StrClemenN Citrus clementina cDNA clone C31705D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923470 ID=FC923470; Name=FC923470; organism=Citrus clementina; type=EST; length=697bp
AAGCCACGCGTTCTCCTCGTGACCGGTTCGTCACCTAAACCGTGCGAGAA
CCCGGTCGGTGATCATTACTTGTTAAAGTCCATAAAGAACAAGATCGATT
ACTGTAGGATTCACGGCATTGAGATATTTTACAACATGGCGCTCTTAGAC
GCTGAAATGGCTGGCTTTTGGGCGAAGCTGCCATTGATAAGGAAATTGCT
TCTGTCACATCCTGAGGTTGAGTTCTTGTGGTGGATGGATTCGGATGCCA
TGTTTACGGATATGGCATTTGAGGTGCCTTGGGAGAGGTACAAGGATCAC
AATTTGGTAATGCACGGGTGGAAAGAGATGGTTTATGATGAAAAGAATTG
GATTGGATTGAATACTGGGAGCTTTTTGTTGAGAAATTGTCAATGGGCGT
TGGATCTTCTAGACGCTTGGGCGCCAATGGGCCCTAAAGGGAAGATTAGG
GACGATGCTGGGAAGATTTTAACTAGAGAGCTTAAGGGGAGGCCAGTTTT
CGAAGCTGATGATCAATCTGCTATGGTGTATTTGTTGATTACTCAAAGGG
ACAAGTGGGGTGAGAAGGTGTATTTGGAGAGTGCTTATTATTTGCACGGG
TATTGGGGGATTTTGGTTGATCGGTATGAGGAGATGATTGAGAATTACCA
TCCGGGTCTTGGCGATCATAGGTGGCCATTGGTTACTCACTTTGTCG
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