FC923547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: SF3_HELAN (Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.928e-65 Identity = 109/164 (66.46%), Postives = 129/164 (78.66%), Query Frame = 3 Query: 189 AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYXQHHHKSL 680 +F GT QKC C+KTVYLVDKL A+ R+YHKACFRCHHC TLKL N+NSF+GV+YCR HFDQLFKRTGSL+KSF+GTPK KPE+ E + ++S+ F GTR+KC C VYP E+V V+GT YH++CFKC HGGC ISPSNYIAHEGRLY +HHH L Sbjct: 3 SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQLFKRTGSLEKSFDGTPKF-KPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQL 165 HSP 2 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 174 NIMAAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGS 398 N +++ F GT+ KC AC K VY ++++ D YH+ACF+C H T+ NY + EG LYC+ H QLFK+ G+ Sbjct: 97 NRLSSFFEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGN 171
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: XIRP2_MOUSE (Xin actin-binding repeat-containing protein 2 OS=Mus musculus GN=Xirp2 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19 Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 186 AAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSF 413 +AF ++ C+ C KTVY ++ L AD + +HK+CFRCHHC L LGNY S G +YC+PHF QLFK G+ D+ F Sbjct: 3248 SAFLSDKEICIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSKGNYDEGF 3323
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: CSRP3_RAT (Cysteine and glycine-rich protein 3 OS=Rattus norvegicus GN=Csrp3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 53/169 (31.36%), Postives = 77/169 (45.56%), Query Frame = 3 Query: 198 GTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTG----------------SLDKSFEGTPKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLY 656 G KC ACDKTVY +++ + R +HK CF C C+ L + E +YC+ + + + G L F+ +PK A+ N +K S FG + EKC C +VY EKV G P+HK+CF C+ G + +N +G LY Sbjct: 5 GGGAKCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRKYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARA-----ATTSNPSKFSAKFGES-EKCPRCGKSVYAAEKVMGGGKPWHKTCFPCAICGKSLESTNVTDKDGELY 167
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: CSRP2_RAT (Cysteine and glycine-rich protein 2 OS=Rattus norvegicus GN=Csrp2 PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 3 Query: 198 GTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT------------PKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLY 656 G KC AC +TVY +++ D R +H+ CF C C+ L + +YC+ + + + G GT P+ A+P +P PN +K + +GG EKC C ++VY EK+ G P+HK+CF+C+ G + + EG +Y Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRTFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTN--PNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIY 166
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: CSRP3_MOUSE (Cysteine and glycine-rich protein 3 OS=Mus musculus GN=Csrp3 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 52/169 (30.77%), Postives = 78/169 (46.15%), Query Frame = 3 Query: 198 GTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTG----------------SLDKSFEGTPKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLY 656 G KC AC+KTVY +++ + R +HK CF C C+ L + E +YC+ + + + G L F+ +PK A+ N +K S FG + EKC C +VY EKV G P+HK+CF+C+ G + +N +G LY Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARA-----ATTSNPSKFSAKFGES-EKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELY 167
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: CSRP2_MOUSE (Cysteine and glycine-rich protein 2 OS=Mus musculus GN=Csrp2 PE=2 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 49/165 (29.70%), Postives = 78/165 (47.27%), Query Frame = 3 Query: 198 GTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT------------PKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLY 656 G KC AC +TVY +++ D R +H+ CF C C+ L + +YC+ + + + G GT P+ A+P +P PN +K + +GG EKC C ++VY EK+ G P+HK+CF+C+ G + + EG +Y Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTN--PNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIY 166
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: CSRP3_HUMAN (Cysteine and glycine-rich protein 3 OS=Homo sapiens GN=CSRP3 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 51/169 (30.18%), Postives = 79/169 (46.75%), Query Frame = 3 Query: 198 GTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTG----------------SLDKSFEGTPKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLY 656 G KC AC+KTVY +++ + R +HK CF C C+ L + E +YC+ + + + G L F+ +PK P + + P+ K + FG + EKC C +VY EKV G P+HK+CF+C+ G + +N +G LY Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPK---PARSVTTSNPS--KFTAKFGES-EKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELY 167
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: CSRP2_HUMAN (Cysteine and glycine-rich protein 2 OS=Homo sapiens GN=CSRP2 PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 3 Query: 198 GTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT------------PKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLY 656 G KC AC +TVY +++ D R +H+ CF C C+ L + +YC+ + + + G GT P+ +P +P PN +K + +GG EKC C ++VY EK+ G P+HK+CF+C+ G + + EG +Y Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTN--PNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIY 166
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: CSRP2_BOVIN (Cysteine and glycine-rich protein 2 OS=Bos taurus GN=CSRP2 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 3 Query: 198 GTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT------------PKIAKPEKPIDGEKPNVAKVSTMFGGTREKCVGCKNTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLY 656 G KC AC +TVY +++ D R +H+ CF C C+ L + +YC+ + + + G GT P+ +P +P PN +K + +GG EKC C ++VY EK+ G P+HK+CF+C+ G + + EG +Y Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTN--PNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIY 166
BLAST of FC923547 vs. ExPASy Swiss-Prot
Match: LIMD2_MOUSE (LIM domain-containing protein 2 OS=Mus musculus GN=Limd2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16 Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 195 AGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSF 413 A ++ C AC KTVY +++L AD I+H +CF C HC L LG+Y + G YCRPHF QLFK G+ D+ F Sbjct: 35 AQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAAMHGEFYCRPHFQQLFKSKGNYDEGF 107 The following BLAST results are available for this feature:
BLAST of FC923547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923547 ID=FC923547; Name=FC923547; organism=Citrus clementina; type=EST; length=682bpback to top |