FC923563

Overview
NameFC923563
Unique NameFC923563
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS19_MOUSE (Dual specificity protein phosphatase 19 OS=Mus musculus GN=Dusp19 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 38/94 (40.43%), Postives = 64/94 (68.09%), Query Frame = 1
Query:  427 TVPIRDMESENLLDYLDVCFDFIDRSR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLDS*NV*RMGFKSS 705
            T+ I D+   N+L Y   CF+FI++++ K+G VLVHC AGVSR+AAI+  +LM +E+ +   AL  ++++  S+CPN GF++     ++G +S+
Sbjct:  113 TISILDVPETNILSYFPECFEFIEQAKLKDGVVLVHCNAGVSRAAAIVIGFLMSSEEATFTTALSLVKEARPSICPNPGFMEQLRTYQVGKESN 206          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS19_HUMAN (Dual specificity protein phosphatase 19 OS=Homo sapiens GN=DUSP19 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  427 TVPIRDMESENLLDYLDVCFDFIDRS-RKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLD 669
            ++ I D+   N+L Y   CF+FI+ + RK+G VLVHC AGVSR+AAI+  +LM +EQ S   A   ++ +  S+CPN GF++
Sbjct:  114 SISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHCNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFME 195          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS12_RAT (Dual specificity protein phosphatase 12 OS=Rattus norvegicus GN=Dusp12 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.735e-13
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  415 LVRMTVPIRDMESENLLDYLDVCFDFIDRSRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGF 663
            L  + VP  D    +LL +LD C  FI ++R EG  VLVHC AGVSRS A++TA++M+TEQL+ E A E+L+        N+GF
Sbjct:   74 LQSLFVPALDKPETDLLSHLDRCVAFIGQARSEGRAVLVHCHAGVSRSVAVVTAFIMKTEQLTFEKAYENLQTIKPEAKMNEGF 157          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS12_HUMAN (Dual specificity protein phosphatase 12 OS=Homo sapiens GN=DUSP12 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.735e-13
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  415 LVRMTVPIRDMESENLLDYLDVCFDFIDRSRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGF 663
            L R+ VP  D    +LL +LD C  FI ++R EG  VLVHC AGVSRS AIITA+LM+T+QL  E A E L+        N+GF
Sbjct:   75 LWRLFVPALDKPETDLLSHLDRCVAFIGQARAEGRAVLVHCHAGVSRSVAIITAFLMKTDQLPFEKAYEKLQILKPEAKMNEGF 158          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUSP4_DICDI (Probable dual specificity protein phosphatase DDB_G0281963 OS=Dictyostelium discoideum GN=DDB_G0281963 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 1
Query:  391 EYAGKDLKLVR-MTVPIRDMESENLLDYLDVCFDFIDRSRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFL 666
            E+  K  K+ + + + I D  S +++ Y D  F FI+  RK+GGVLVHCFAG+SRSA I  AY+MR   +S E A   +  +   + PN+ F+
Sbjct:   38 EFQPKWTKIYKYLHIDIYDSPSVDIMKYFDKTFQFIEEGRKDGGVLVHCFAGISRSATICIAYIMRKLNISFEDAHGLVSDARPIIYPNESFI 130          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: PTP3_CHLMO (Dual specificity protein phosphatase OS=Chlamydomonas moewusii GN=VH-PTP13 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.241e-12
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  424 MTVPIRDMESENLLDYLDVCFDFIDRSRKEGGV-LVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGF 663
            +++PI DME ++++  L  CF F+ +++  GGV LVHC AG+SRSA+++ AYLM T+ +    A   +R++   V PN GF
Sbjct:  135 LSLPILDMEGQDIVALLPSCFQFLQQAQASGGVCLVHCLAGISRSASVVIAYLMWTQGMPYTEARAMVRRARSKVYPNTGF 215          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS12_MOUSE (Dual specificity protein phosphatase 12 OS=Mus musculus GN=Dusp12 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1
Query:  430 VPIRDMESENLLDYLDVCFDFIDRSRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGF 663
            VP  D    +LL +LD C  FI ++R EG  VLVHC AGVSRS A++ A++M+T+QL+ E A + LR        N+GF
Sbjct:   79 VPALDKPETDLLSHLDRCVAFIGQARSEGRAVLVHCHAGVSRSVAVVMAFIMKTDQLTFEKAYDILRTVKPEAKVNEGF 157          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS5_RAT (Dual specificity protein phosphatase 5 OS=Rattus norvegicus GN=Dusp5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1
Query:  430 VPIRDMESENLLDYLDVCFDFIDRSRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFL 666
            +P+ D  + ++  +     DFID  R+EGG VLVHC AGVSRS  I  AYLM+T+Q   + A E ++Q    V PN GF+
Sbjct:  228 IPVEDSHTADISSHFQEAIDFIDCVREEGGKVLVHCEAGVSRSPTICMAYLMKTKQFRLKEAFEYIKQRRSVVSPNFGFM 307          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS8_HUMAN (Dual specificity protein phosphatase 8 OS=Homo sapiens GN=DUSP8 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  424 MTVPIRDMESENLLDYLDVCFDFIDRSRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFL 666
            M VPI D   E LL +LD   +FID+++     V+VHC AG+SRSA I  AY+M+T  +SS+ A   ++    S+ PN  FL
Sbjct:  209 MRVPINDNYCEKLLPWLDKSIEFIDKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFL 290          
BLAST of FC923563 vs. ExPASy Swiss-Prot
Match: DUS8_MOUSE (Dual specificity protein phosphatase 8 OS=Mus musculus GN=Dusp8 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  424 MTVPIRDMESENLLDYLDVCFDFIDRSRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFL 666
            M +PI D   E LL +LD   +FID+++     V+VHC AG+SRSA I  AY+M+T  +SS+ A   ++    S+ PN  FL
Sbjct:  209 MRIPINDNYCEKLLPWLDKSIEFIDKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFL 290          
The following BLAST results are available for this feature:
BLAST of FC923563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
DUS19_MOUSE2.317e-1440.43Dual specificity protein phosphatase 19 OS=Mus mus... [more]
DUS19_HUMAN2.317e-1445.12Dual specificity protein phosphatase 19 OS=Homo sa... [more]
DUS12_RAT9.735e-1347.62Dual specificity protein phosphatase 12 OS=Rattus ... [more]
DUS12_HUMAN9.735e-1351.19Dual specificity protein phosphatase 12 OS=Homo sa... [more]
DUSP4_DICDI2.169e-1240.86Probable dual specificity protein phosphatase DDB_... [more]
PTP3_CHLMO8.241e-1241.98Dual specificity protein phosphatase OS=Chlamydomo... [more]
DUS12_MOUSE2.398e-1146.84Dual specificity protein phosphatase 12 OS=Mus mus... [more]
DUS5_RAT3.132e-1145.00Dual specificity protein phosphatase 5 OS=Rattus n... [more]
DUS8_HUMAN6.977e-1143.90Dual specificity protein phosphatase 8 OS=Homo sap... [more]
DUS8_MOUSE9.112e-1142.68Dual specificity protein phosphatase 8 OS=Mus musc... [more]
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Properties
Property NameValue
Genbank descriptionC31706E07EF StrClemenN Citrus clementina cDNA clone C31706E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923563 ID=FC923563; Name=FC923563; organism=Citrus clementina; type=EST; length=732bp
GAAGCGAGGAAGAAAGAGTCTTGAGATTACACCATCGCCGGAATATTCCT
TATTTTCAGGGCGAAAAGGTGAACTAGCTCTTTGCTAAAGAGCCATTGTT
CTTCTGTTGTCATGCCATACCTTGTCCGTGAGCATCTATTCATTGGAAAC
ATATCGGATGCAGCAGACATTCTCCAAAATGGTAGCTCTGGAATTACACA
TATGCTATCAGTTTTGAGCTCTGCATCCATATCATTTTTCACTGAATGGC
GTAGCAGTCTTACGATCCCCTCCAAGGAGATTAAGAAGGTTTATGCTGGT
GGATCCGGTGATGGTGGTTCGGGCTCTGTGGATGATCTAGGTGATGGGTC
AAGAAGCTGTTTGTCCCCCACAAAACTCTTGTACTCATTGGAATATGCTG
GCAAGGATTTGAAGCTGGTGAGAATGACTGTGCCTATAAGAGATATGGAA
AGTGAGAATTTGTTGGATTATTTGGATGTATGTTTTGATTTCATTGATCG
GAGTAGAAAGGAGGGGGGTGTTTTGGTTCATTGCTTTGCAGGAGTGTCCA
GGAGTGCAGCTATCATTACAGCATATTTGATGAGAACTGAGCAACTATCT
TCAGAAGGTGCACTTGAATCTCTACGGCAGAGCTGTGAGTCTGTTTGTCC
CAATGATGGCTTTTTAGACAGTTGAAATGTTTGAAGAATGGGCTTTAAGT
CATCGTGGTAGCCCCATTACAGCGATTTCCCT
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