FC923570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_RAT (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Rattus norvegicus GN=Polr2f PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 493 R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 51 RITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIISD 127
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Mus musculus GN=Polr2f PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 493 R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 51 RITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIISD 127
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_PONAB (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Pongo abelii GN=POLR2F PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.556e-30 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 493 R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 51 RITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Homo sapiens GN=POLR2F PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.556e-30 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 493 R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 51 RITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_CRIGR (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Cricetulus griseus GN=POLR2F PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.556e-30 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 493 R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 51 RITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_BOVIN (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Bos taurus GN=POLR2F PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.556e-30 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 493 R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 51 RITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_YEAST (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Saccharomyces cerevisiae GN=RPO26 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29 Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 490 R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+KIP IRRYLPDGS+EDW V+ELIV+ Sbjct: 79 RATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYLPDGSFEDWSVEELIVD 154
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_DROME (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Drosophila melanogaster GN=RpII18 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.467e-29 Identity = 59/78 (75.64%), Postives = 71/78 (91.03%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDS 496 R T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLPD SYEDW +DELI+ D+ Sbjct: 54 RITTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDHSYEDWSIDELIMVDN 131
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_SCHPO (DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Schizosaccharomyces pombe GN=rpb6 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.615e-28 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 484 R T+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPL+IAMKEL ++KIP +RRYLPDGSYEDW V ELI Sbjct: 69 RTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAMKELAQKKIPLLVRRYLPDGSYEDWSVAELI 142
BLAST of FC923570 vs. ExPASy Swiss-Prot
Match: RPAB2_DICDI (DNA-directed RNA polymerases I, II, and III subunit rpabc2 OS=Dictyostelium discoideum GN=polr2f PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.597e-28 Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 2 Query: 263 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIV 487 RKT++YMTKYERAR+LG+RALQISMNAP+MVELEGETDPL+IA KELR +KIP IRR+LP+G YEDW VDEL + Sbjct: 59 RKTTRYMTKYERARLLGSRALQISMNAPIMVELEGETDPLQIAWKELRAKKIPLIIRRFLPNGMYEDWSVDELSI 133 The following BLAST results are available for this feature:
BLAST of FC923570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923570 ID=FC923570; Name=FC923570; organism=Citrus clementina; type=EST; length=725bpback to top |