FC923610

Overview
NameFC923610
Unique NameFC923610
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923610 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 2.174e-108
Identity = 191/248 (77.02%), Postives = 206/248 (83.06%), Query Frame = 1 
Query:    1 EDVSIIPQPAGDTGKVDLIMNVVERPXXXXXXXXXXXXXXXXXXXXXXXXXFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLFSLSGGHVVXNF 744
            EDVSIIPQPAGD+GKVDLIMN VERP                         FAYSHRN+FGRNQKLN+SLERGQIDSIFRINYTDPWIEGDDKRTSR+IMVQNSRTPG  VHGNQPDNSSLTIGRVTAG+E+SRP RPKW+GT GLIFQH+GARDE+GNPIIKDFYSSPLTASGK +DE ++AK ES+YTGSGDQGS+MF FNMEQGLPV PEWL FNRV  RARKG+ IGPAR LFSLSGGHVV  F
Sbjct:  372 EDVSIIPQPAGDSGKVDLIMNCVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQNSRTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKF 619
[Close]
BLAST of FC923610 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 6.561e-97
Identity = 172/249 (69.08%), Postives = 199/249 (79.92%), Query Frame = 1 
Query:    1 EDVSIIPQPAGDTGKVDLIMNVVERPXXXXXXXXXXXXXXXXXXXXXXXXXFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHG-NQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLFSLSGGHVVXNF 744
            EDV+IIPQP GD+ KVDL+MN+VERP                         FAYSHRNVFGRN+KLN+SLERGQIDSIFR+NYTDPWI+GD+KRTSRTIMVQNSRTPGT +HG + PD+  +TIGRVTAG+E+SRP RPKWSGT+GLIFQH+GARD+KGNPII+DFY+S LTASG   D+ L+AK ESVYT SGD+ S+MFVFN+EQGLP+ PEWL FNRV AR R+G EIGPARLL S SGGHV  NF
Sbjct:  304 EDVTIIPQPVGDSNKVDLVMNLVERPSGGFSAGGGISSGITNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNF 552
[Close]
BLAST of FC923610 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 6.561e-97
Identity = 172/249 (69.08%), Postives = 199/249 (79.92%), Query Frame = 1 
Query:    1 EDVSIIPQPAGDTGKVDLIMNVVERPXXXXXXXXXXXXXXXXXXXXXXXXXFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHG-NQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLFSLSGGHVVXNF 744
            EDV+IIPQP GD+ KVDL+MN+VERP                         FAYSHRNVFGRN+KLN+SLERGQIDSIFR+NYTDPWI+GD+KRTSRTIMVQNSRTPGT +HG + PD+  +TIGRVTAG+E+SRP RPKWSGT+GLIFQH+GARD+KGNPII+DFY+S LTASG   D+ L+AK ESVYT SGD+ S+MFVFN+EQGLP+ PEWL FNRV AR R+G EIGPARLL S SGGHV  NF
Sbjct:  304 EDVTIIPQPVGDSNKVDLVMNLVERPSGGFSAGGGISSGITNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNF 552
The following BLAST results are available for this feature:
BLAST of FC923610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP80_ARATH2.174e-10877.02Outer envelope protein of 80 kDa OS=Arabidopsis th... [more]
OEP80_ORYSJ6.561e-9769.08Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
OEP80_ORYSI6.561e-9769.08Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionC31707A09EF StrClemenN Citrus clementina cDNA clone C31707A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923610 ID=FC923610; Name=FC923610; organism=Citrus clementina; type=EST; length=744bp
GAAGATGTTAGCATTATTCCTCAACCTGCAGGAGATACTGGCAAGGTTGA
TTTGATAATGAATGTTGTTGAGCGGCCAAGTGGAGGTTTTTCTGCTGGTG
GCGGTATATCAAGTGGGATCACAAGTGGCCCTTTATCTGGACTCATTGGA
AGCTTTGCATATTCTCATAGGAATGTTTTTGGAAGAAACCAAAAACTCAA
TATCTCCTTGGAGAGGGGTCAAATTGACTCTATATTTCGCATAAACTACA
CTGACCCATGGATTGAAGGAGATGACAAACGAACATCAAGAACTATAATG
GTTCAGAATTCAAGAACCCCTGGAACGCATGTTCATGGAAACCAGCCTGA
TAACAGTAGTCTGACCATTGGCCGTGTGACAGCTGGTATGGAATTTAGTC
GACCAATCAGGCCTAAATGGAGTGGGACAGTAGGACTTATTTTTCAGCAT
TCTGGTGCTCGTGATGAAAAAGGAAATCCTATTATCAAGGATTTCTACAG
TAGTCCTCTTACAGCAAGTGGTAAGACTAATGATGAAATGTTAATTGCTA
AATTTGAGAGTGTCTATACTGGTTCTGGCGACCAAGGGTCCTCAATGTTT
GTATTTAACATGGAACAAGGACTTCCTGTTTGGCCAGAGTGGTTGTTCTT
CAATAGAGTGAATGCTCGTGCCAGAAAGGGTGTAGAAATTGGACCTGCTC
GCCTTCTTTTTAGTTTGTCCGGTGGGCATGTAGTANGTAATTTC
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