FC923622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.198e-58 Identity = 113/176 (64.20%), Postives = 131/176 (74.43%), Query Frame = 2 Query: 173 SIIHDMMWRRSHRVVGDAADHDMAGGSSPTC----CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 SI + RSHR G A G + CWA LP ELLRE+L +IE ++ WPSRR VVACAGVCRSWR ITKEIV+VPE SG LTFPIS+KQPGPRD L+CFI+RNR+TQTY+LY+ LT ALADDGKFLLAARKCR+ TCTDY+ISL D KGS+TY+G+LRS F Sbjct: 16 SISRHSLRSRSHRGGGGAPRVAAVGPAEAAAMQQSCWAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNF 191
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.158e-56 Identity = 113/177 (63.84%), Postives = 132/177 (74.58%), Query Frame = 2 Query: 161 MTIKSIIHDMMWRRSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 MT +S++ +M R HRVV AA SS W+ LP+ELLREIL ++E D WPSRR+VVACAGVCRSWR +TKEIV VPE S LTFPIS+KQ GPRD L+QCFIKRNR+TQ+YHLYL LT +L D+GKFLLAA K +RATCTDYIISL SDD K S+ YLG +RS F Sbjct: 1 MTFRSLLQEMR-SRPHRVVHAAAS---TANSSDPFSWSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNF 173
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.560e-55 Identity = 113/180 (62.78%), Postives = 133/180 (73.89%), Query Frame = 2 Query: 161 MTIKSIIHDMMWRRSHRVVGD---AADHDMAGGSSPTCCWANLPQELLREILAKIEAADSA-WPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 MT++S+I +M R HRVV D AA D SS W+ +P+ELLREIL ++EAAD WPSRRSVVACAGVCR WR + E V VPE+S LTFPIS+KQPGPRD L+QCFIKRNR TQ+YHLYL LTN+L DDGKFLLAA K + TCTDYIISL SDD + S Y+G++RS F Sbjct: 1 MTLRSLILEMR-SRPHRVVHDLAAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNF 179
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.460e-52 Identity = 94/141 (66.67%), Postives = 115/141 (81.56%), Query Frame = 2 Query: 266 CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 CW LP ELLRE+LA++E ++ WP RR VVACAGVCRSWR I +EIV+ PE SG LTFPIS+KQPGPRD ++CFI RNR+TQTY+LY+ LT+AL DDGKFLLAARKCRR TCT+Y+ISL +D K + +Y+G+LRS F Sbjct: 54 CWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNF 194
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.708e-52 Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 2 Query: 200 RSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNALA-DDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 RS RVV D + A S CWA++P ELLR++L +IE ++ WPSR++VV+CAGVCR+WR I KEIV+VPELS LTFPIS+KQPGPR L+QC+I RNRS QTY+LYL L A + DDGKFLLAA++ RR TCTDYIISL+ DD +GS+TY+G+LRS F Sbjct: 32 RSQRVVQDTSVPVDAFKQS---CWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNF 192
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46 Identity = 87/165 (52.73%), Postives = 126/165 (76.36%), Query Frame = 2 Query: 200 RSHRVVGDAADHDMAGGSSP---TCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRS 682 RSH V + D A ++ + CWANLP ELLR+++ ++EA+++AWPSR++VVACA VCR+WR + +EIVK PE G +TFP+S+KQPGPR+ +QCFIKR++STQTY+LYL L++A L + GKFLL+A++ RATCT+Y I + +D+ + S+ Y+G+LRS Sbjct: 33 RSHSAVHELRDGHAAAAAADVVQSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRS 197
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.837e-46 Identity = 88/164 (53.66%), Postives = 123/164 (75.00%), Query Frame = 2 Query: 200 RSHRVVGDAADHDMAGGSSPTCCWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 +S V + D D+ S WA+LP ELLR+++ ++EA++S WPSR+ VV+CA VC++WR + KEIV PE G LTFP+S+KQPGPRD ++QCFIKR++S TYHLYL L+ A LAD GKFLL+A++ R+ TCT+Y+IS+ +D+ + SSTY+G+LRS F Sbjct: 39 KSQSTVHELCDADLIIQESR---WASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNF 199
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.837e-46 Identity = 84/141 (59.57%), Postives = 115/141 (81.56%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 WANLP ELLR+++ ++E ++S WP+RR VVACA VCRSWR + KEIV+ PELSG +TFP+S+KQPGPRD +QCFIKR++S TYHLYL L+ A L ++GKFLL+A++ RR T T+Y+IS+H+D + S+TY+G++RS F Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNF 197
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.078e-45 Identity = 82/141 (58.16%), Postives = 116/141 (82.27%), Query Frame = 2 Query: 269 WANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 WANLP LLR+++ K++ ++S WP+R+ VVACAGVC++WR + K+IVK PE SG LTFP+S+KQPGPRD ++QC+IKR++S TYHLYLSL+ A L + GKFLL+A++ RRAT T+Y+IS+ +D+ + SSTY+G+L+S F Sbjct: 55 WANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNF 195
BLAST of FC923622 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.408e-45 Identity = 83/142 (58.45%), Postives = 119/142 (83.80%), Query Frame = 2 Query: 266 CWANLPQELLREILAKIEAADSAWPSRRSVVACAGVCRSWRRITKEIVKVPELSGYLTFPISVKQPGPRDYLLQCFIKRNRSTQTYHLYLSLTNA-LADDGKFLLAARKCRRATCTDYIISLHSDDXVKGSSTYLGELRSIF 688 CWA+LP ELLR+I+ ++E +++ WPSR+ VVACAGVCR+WR + KEIVK PEL G +TFPIS++QPGPRD +QCFI+R++STQTY+LYLSL +A L D+GKFLL+A++ ATCT+Y+IS+++++ + ++T +G+LRS F Sbjct: 52 CWASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTNTNIGKLRSNF 193 The following BLAST results are available for this feature:
BLAST of FC923622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923622 ID=FC923622; Name=FC923622; organism=Citrus clementina; type=EST; length=714bpback to top |