FC923623

Overview
NameFC923623
Unique NameFC923623
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923623 vs. ExPASy Swiss-Prot
Match: Y4833_ARATH (Uncharacterized protein At4g08330, chloroplastic OS=Arabidopsis thaliana GN=At4g08330 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.851e-39
Identity = 80/124 (64.52%), Postives = 92/124 (74.19%), Query Frame = 1 
Query:  367 YSCGSCGYELNLSSCNRNISSIGLKYGKSMKRGIISFVDIDESRFTQVDELQCIPHFSKNSWGILRHRTKLLCRKCGNPIGIAYTDXTSAYSPKSNGSDSPSVPGASGRRKYDXRIRTLQPSSS 738
            YSCGSCGYELNLSS NR  S+IG KYGKSMK GIISF +IDE RF+QVDE QC+PHFS+ SWG+ RHRTKLLCRKC N IG A  +    Y+  +  SD P+ P      KYD RIR+LQPSS+
Sbjct:   38 YSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRYSWGLFRHRTKLLCRKCNNYIGNASQEKAPEYALVTQNSD-PTSPRIGSVTKYDIRIRSLQPSSA 160
The following BLAST results are available for this feature:
BLAST of FC923623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4833_ARATH4.851e-3964.52Uncharacterized protein At4g08330, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionC31707B10EF StrClemenN Citrus clementina cDNA clone C31707B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923623 ID=FC923623; Name=FC923623; organism=Citrus clementina; type=EST; length=750bp
GGAAACTAGCAAGTAAAGGATAAACAAAGAGCCACCTCCATCTCCGCTCT
CAGCTTTAACTTTCTGTTTACCCCTGCAATATTTCGAAGAAACTGCTTAA
ACTCACCCGATTCAGACGGTTATGCGTTTTTTTTTTCCCTTTTCATCCGC
TACTTAACGGTTGCCTCCTCAGTTCGGGTTAGCTTCGAGGCAGTTGATTC
AATTGTTTTGCTCAGTTGTTAAGCTTTGCTCGAGTCACAGACACGATCAG
AGCCGTTGATTTGTCTGTGGAAACCAAAATAAGAAAAAAAAATGGAGGAA
TCTGTGTATGTTAATGGAAGTCACCATCACTCCTTTTCTTCATCGATTTC
TCAAAGACATGTTAGCTACAGCTGTGGTTCTTGTGGGTATGAGCTAAACC
TTAGCTCTTGTAATAGAAACATCTCATCTATTGGATTAAAATACGGAAAA
TCTATGAAGCGAGGGATAATATCGTTCGTAGACATAGATGAGAGCAGATT
TACTCAAGTTGATGAGTTGCAATGCATACCCCACTTCTCCAAAAACTCGT
GGGGCATTTTGCGCCATAGAACCAAACTTCTCTGCCGTAAGTGTGGTAAC
CCTATTGGAATTGCTTATACCGACNAAACCTCAGCATACTCACCCAAATC
AAATGGATCAGATTCACCTTCAGTCCCTGGTGCTTCTGGTCGTAGGAAAT
ATGATNGTAGAATACGTACCTTACAGCCTTCATCCAGTGAGGAATCTGGC
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