FC923638

Overview
NameFC923638
Unique NameFC923638
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14513 contig Ccv1_Contig14513:1..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.758e-72
Identity = 139/209 (66.51%), Postives = 160/209 (76.56%), Query Frame = 3
Query:   93 MAEEKLQVPRVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLPREKVQIATKFGVV----GLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            MA+E  +VPR+KLG+QGLEVS  GLGCM +S+ Y  P  E D I +I HA + GIT  DT+DVYG + NEILLGKA K   RE+V +ATKFG+V       +    V G P YVR  CEASLKRLD+D IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD+EEEIIP CRE  I
Sbjct:    1 MAKEGTKVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGI 209          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.819e-69
Identity = 133/205 (64.88%), Postives = 153/205 (74.63%), Query Frame = 3
Query:   93 MAEEKLQVPRVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLPREKVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            MA   + VPR+KLG+QGLEVS  GLGCM +S+ Y  P  E + I +I HA   G+TF DT+DVYG + NE+LLGKA +   REKV++ATKFGV    D    + G P YVR  CE S KRL VD IDLYYQHR+D  VPIE TIGE+KKLVEEGKIKYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD EE+IIP CRE  I
Sbjct:    1 MAAALVSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGV-SFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGI 204          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38
Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 3
Query:  108 LQVPRVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLPREK-VQIATKFGVVGLRDNGVI-VKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE---IIPLCRETRI 707
            + +P  K+G     V  +G GCM L + Y  P SEE   +++ HA   G TF+D++D+YG  ANE  +G+ FK   R K + +ATKFG     + G + +   PDY+    + SLKRL +D IDLYY HR     PIE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I
Sbjct:    1 MSIPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNI 202          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24
Identity = 69/190 (36.32%), Postives = 105/190 (55.26%), Query Frame = 3
Query:  141 GLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKML-PREKVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            G+E S++GLG   +         E+  I  I+ A  +GIT  DTA  YG   +E ++GKA K    R++V +ATK  +   ++N +        +    E SLKRL  DYIDLY  H  D  VPIEET   MK+L + GKI+ IG+S  S + +    AV P+  +Q  ++L+ R++EE ++P  ++ +I
Sbjct:   10 GIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTAL-DWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKI 198          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 64/197 (32.49%), Postives = 107/197 (54.31%), Query Frame = 3
Query:  120 RVKLGTQGLEVSKLGLGCMNLSSGYSSP-VSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLPREKVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            + KLG   L+V  +GLG   +      P ++EE G  +++ A   G+T  DTA +YG   +E L+G+  +   RE V IATK      + N  +   +PD+++   + SLKRL+ DYIDL+Y H  D   P +E +  + ++ + GKI+ IG+S  S + ++ A+    +  +Q E++L  R+ E+   P  +E  I
Sbjct:    3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATK-AAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNI 198          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24
Identity = 69/210 (32.86%), Postives = 109/210 (51.90%), Query Frame = 3
Query:  120 RVKLGTQGLEVSKLGLGCMNLSSG--YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLPREKVQIATKFGVVGLRDNGVIVKG---------TPDYVRLCCEASLKRLDVDYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            ++ LGT  + +S++GLG   +  G  ++  +  +  I  I  A   GI   DTA  Y    +E+++G+A K LPRE+V + TK G+V  R   +  K          +P+ +R    ASL+RL +DYID+Y  H         PI ET+  + +L  EGKI+ IG +    D IR       +  +Q ++S+  R +E E++PLCR+  I
Sbjct:    3 KIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGI 212          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23
Identity = 68/195 (34.87%), Postives = 105/195 (53.85%), Query Frame = 3
Query:  129 LGTQGLEVSKLGLGCMNLSSGYSSP-VSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLP-REKVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            LG   L+V ++G G   +      P +++E G  +++ A   G+ F DTA +YG   +E L+G+  +    R ++ IATK G     D  + +  + +++R   E SLKRL  DYIDLYY H  D   P+ E  G +K+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E+E++P C +  I
Sbjct:    7 LGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATK-GAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGI 200          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23
Identity = 71/196 (36.22%), Postives = 110/196 (56.12%), Query Frame = 3
Query:  141 GLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN---ANEILLGKAFKMLPRE--KVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRL-DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEE-IIPLCRETRI 707
            G +V  +G G M L+        +E+   ++ +A S+G  ++D  + YG +   +N  LL + F+  P    KV ++ K G   L    ++  G PD+V    E  +  L     +DL+   RVD +VPIE T+  +K  V+ GKI  +GLSE S +TI+RAHAV PI AV++E+SL++RDIE   I+ +CR+  I
Sbjct:    6 GFKVGPIGFGLMGLT-WKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGG---LDFKTLVPDGNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSI 197          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YH5B_SCHPO (Uncharacterized oxidoreductase C215.11c OS=Schizosaccharomyces pombe GN=SPBC215.11c PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21
Identity = 69/211 (32.70%), Postives = 112/211 (53.08%), Query Frame = 3
Query:   81 TASKMAEEKLQVPRVKLGTQGLEVSKLGLGCMNLSSG--YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLPREKVQIATKFGVVGLRDNGVIVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            TA+  A +  Q   VK+G   + V+++G G M ++    +  P  +E  I+ +K      I F DTAD YG   +E LL +A  + P + + IATK G+V    N     G P ++R     S++RL V  IDL+  HR+D  VP ++   E+  + +EG I+++GLSE + D I+ A    P+ +VQ  ++L  R   E+++  C +  I
Sbjct:    4 TAASSAVDASQAGTVKVGD--MVVNRMGFGAMRVTGDGIWDEPKDKEACIATLKRLPELNINFIDTADSYGPEVSENLLREA--LYPYKGLIIATKGGLVRTGPNEWHPCGAPKFLRQEVLMSMRRLGVKQIDLWQLHRIDPKVPRKDQFSEIAAMKKEGLIRHVGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRK-NEKVLEYCEQKGI 209          
BLAST of FC923638 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21
Identity = 68/197 (34.52%), Postives = 106/197 (53.81%), Query Frame = 3
Query:  126 KLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEILLGKAFKMLPREKVQIATKFGVVGLRDNGV---IVKGTPDYVRLCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRETRI 707
            KLGT  L++S++GLGCM+L +       +   +S++  A   GI + DTAD+Y +  NE ++G A +   R  + +ATK G     D+G        +  Y++   + SL RL  DYIDLY  H       I+ETI   ++L +EG I+Y G+S   P+ I+       I ++ M++SL+ R   EE +PL  E +I
Sbjct:    5 KLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQNR-RHDIILATKAG--NRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRR-PEEWLPLLEEHQI 191          
The following BLAST results are available for this feature:
BLAST of FC923638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
A115_TOBAC1.758e-7266.51Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE1.819e-6964.88IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO2.832e-3843.90Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
GS69_BACSU1.045e-2436.32General stress protein 69 OS=Bacillus subtilis GN=... [more]
IOLS_BACSU1.782e-2432.49Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YDJG_ECOLI2.328e-2432.86Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
YCCK_BACSU4.390e-2334.87Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
PLR1_SCHPO5.733e-2336.22Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YH5B_SCHPO1.412e-2132.70Uncharacterized oxidoreductase C215.11c OS=Schizos... [more]
YQKF_BACSU5.366e-2134.52Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionC31707D02EF StrClemenN Citrus clementina cDNA clone C31707D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923638 ID=FC923638; Name=FC923638; organism=Citrus clementina; type=EST; length=709bp
GGCTCATTGTTGACGTTAGAGTCAACTGTCTCTCTACTTATTGAAACTTG
AAAGACACCCAAAACAAAGAAACCAAAACTACAGCTTCAAAAATGGCAGA
AGAGAAACTCCAAGTTCCAAGAGTGAAACTTGGTACCCAAGGCCTCGAGG
TTTCAAAGTTGGGGCTTGGATGCATGAACCTGAGTTCTGGTTATAGCTCT
CCAGTCTCAGAAGAGGATGGCATCTCAATGATAAAACATGCTTTCAGTAA
AGGAATCACTTTCTTTGATACTGCTGATGTGTACGGACAAAATGCTAATG
AAATTCTTCTGGGAAAGGCCTTCAAGATGTTGCCCAGAGAAAAGGTACAA
ATAGCCACAAAGTTTGGGGTTGTAGGACTAAGAGATAATGGCGTGATCGT
GAAGGGCACCCCTGATTACGTGCGCTTGTGTTGTGAAGCTAGCCTGAAGC
GACTTGATGTGGATTACATTGATCTATATTATCAACATAGAGTGGACACA
TCAGTCCCCATAGAGGAAACCATTGGTGAAATGAAGAAGCTGGTGGAAGA
GGGTAAAATCAAGTACATTGGATTATCTGAGGCCAGCCCAGACACAATTA
GGAGAGCACATGCTGTTCATCCCATCACAGCTGTACAAATGGAATGGTCC
CTCTGGACTCGTGATATTGAGGAAGAGATAATACCCCTCTGCAGGGAAAC
TCGCATTGG
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