FC923657

Overview
NameFC923657
Unique NameFC923657
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14515 contig Ccv1_Contig14515:1..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 424.861 bits (1091), Expect = 2.214e-118
Identity = 203/244 (83.20%), Postives = 216/244 (88.52%), Query Frame = 2
Query:    2 VWHKVKLVRDA-SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSG-DDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            VWHKVKL+RD   PA +CTLGELLRSKSQEGVRVLL +WDDPTSRSILGYK DGVM THDEETRR FKHSSV+VLLCPR AGKRHSW KQ+EVGTIYTHHQK VIVDADAG NRRKIIAFVGGLDLCDGRYD P HPLFRTLQT+H DD+HNPTFTGN +GCPREPWHDLHSKIDGPAAYDVLTNFEERW KA KP GIKK K   DDALLRI+RIP I+G+SD P+V END E+WH QIFRSI
Sbjct:  384 VWHKVKLIRDKLGPASECTLGELLRSKSQEGVRVLLSIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRNAGKRHSWVKQREVGTIYTHHQKNVIVDADAGGNRRKIIAFVGGLDLCDGRYDTPQHPLFRTLQTIHIDDFHNPTFTGNLSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPSGIKKFKLPIDDALLRIDRIPDILGVSDTPTVSENDPEAWHVQIFRSI 627          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 381.333 bits (978), Expect = 2.807e-105
Identity = 186/236 (78.81%), Postives = 202/236 (85.59%), Query Frame = 2
Query:    2 VWHKVKLVRDAS-PALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLK-SGDDALLRIERIPGIIGISDAPSV-RENDAES 700
            VWH V+LVRD   P+ +C LGELLRSKSQEGVRVLLLVWDDPTS++ILGY  DGVM THDEETRR FK SSV+VLLCPR AGKRHSW KQ+EVGTIYTHHQK +IVDADAG NRRKI+AFVGGLDLCDGRYD P HPLFRTLQT H  DYHNPTFTGN +GCPREPWHDLHSKIDGPAAYDVLTNFEERW KA KPH I KLK S DDALLRI+RIP I+ + DAP++ R  D+ S
Sbjct:  345 VWHNVRLVRDKEDPSSECRLGELLRSKSQEGVRVLLLVWDDPTSQNILGYMTDGVMGTHDEETRRFFKDSSVQVLLCPRNAGKRHSWVKQREVGTIYTHHQKNLIVDADAGGNRRKIVAFVGGLDLCDGRYDTPQHPLFRTLQTDHNGDYHNPTFTGNVSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPHRINKLKTSYDDALLRIDRIPDILRVLDAPTIFRSIDSNS 580          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.478e-101
Identity = 176/243 (72.43%), Postives = 200/243 (82.30%), Query Frame = 2
Query:    2 VWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLK-SGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+H V+LVR  +   + TLGELL+ KSQEGVRVL+LVWDDPTSRS+LG+K  GVM T DEETRR FKHSSV+VLLCPR  GK HS+ K+ EVGTIYTHHQKTVIVDA+A  NRRKI+AFVGGLDLC+GR+D P HPLFRTL+TLHKDD+HNP F       PREPWHDLHSKIDGPAAYDVL NFEERW KA KP GI KLK S DD+LLRI+RIP I+G+S+A S  +ND ESWH Q+FRSI
Sbjct:  271 VFHPVRLVRRTNDPTEGTLGELLKVKSQEGVRVLVLVWDDPTSRSLLGFKTQGVMNTSDEETRRFFKHSSVQVLLCPRSGGKGHSFIKKSEVGTIYTHHQKTVIVDAEAAQNRRKIVAFVGGLDLCNGRFDTPKHPLFRTLKTLHKDDFHNPNFVTTADDGPREPWHDLHSKIDGPAAYDVLANFEERWMKASKPRGIGKLKSSSDDSLLRIDRIPDIVGLSEASSANDNDPESWHVQVFRSI 513          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 6.268e-97
Identity = 168/243 (69.14%), Postives = 197/243 (81.07%), Query Frame = 2
Query:    2 VWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLK-SGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+H V+LVR  +     TLGELL+ KSQEGVRVL+LVWDDPTSRS+LG+   G+M T DEETRR FKHSSV+VLLCPR  GK HS+ K+ EV TIYTHHQKT+IVDA+A  NRRKI+AFVGGLDLC+GR+D P HPLFRTL+T+HKDD+HNP F       PREPWHDLHSKIDGPAAYDVL NFEERW KA KP GI +L+ S DD+LLR++RIP I+G+S+A S  +ND ESWH Q+FRSI
Sbjct:  278 VFHPVRLVRRNNDPTQGTLGELLKVKSQEGVRVLVLVWDDPTSRSLLGFSTKGLMNTSDEETRRFFKHSSVQVLLCPRYGGKGHSFIKKSEVETIYTHHQKTMIVDAEAAQNRRKIVAFVGGLDLCNGRFDTPKHPLFRTLKTIHKDDFHNPNFVTTADDGPREPWHDLHSKIDGPAAYDVLANFEERWMKASKPRGIGRLRTSSDDSLLRLDRIPDIMGLSEASSANDNDPESWHVQVFRSI 520          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 332.798 bits (852), Expect = 1.145e-90
Identity = 165/243 (67.90%), Postives = 190/243 (78.19%), Query Frame = 2
Query:    2 VWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLK-SGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+H V+LVR  +   + TLGELL+ KSQEGVRVL+LVWDDPTS S  G+   G+M T DEETRR FKHSSV+VLLCPR  GK HS+ K+ EV TIYTHHQKT+IVDA+A  NRRKI+AFVGGLDLC+GR+D P H LF TL+TLHKDD+HNP F       PREPWHDLHSKIDGPAAYDVL NFEERW  A KP GI K + S DD+LLRI RIP I+G+S+A S  +ND ESWH Q+FRSI
Sbjct:  269 VFHPVRLVRRNNDPTEGTLGELLKVKSQEGVRVLVLVWDDPTSMSFPGFSTKGLMNTSDEETRRFFKHSSVQVLLCPRYGGKGHSFIKKSEVETIYTHHQKTMIVDAEAAQNRRKIVAFVGGLDLCNGRFDTPKHSLFGTLKTLHKDDFHNPNFVTTEDVGPREPWHDLHSKIDGPAAYDVLANFEERW-MASKPRGIGKGRTSFDDSLLRINRIPDIMGLSEASSANDNDPESWHVQVFRSI 510          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.530e-70
Identity = 144/276 (52.17%), Postives = 172/276 (62.32%), Query Frame = 2
Query:    2 VWHKVKLVRDASPALD--CTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKE-----------VGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSG-----DDALLRIERIPGIIG-----ISDAPSV-----------RENDAESWHXQIFRSI 727
            ++HK+KLVR+     D   TLGELL+ KSQEGVRVLLLVWDD TS    G K  GVM THDEETR+ FKHSSV  +L PR A  +    KQ+            VGT++THHQK V+VD  A  N RK+ AF+GGLDLCDGRYD P H +   L T+ KDD+HNPTF   T   PR+PWHDLH +IDGPAAYDVL NFE+RWRKA +         G     DDAL+RI RI  I+      + D  S+           +E+D E+WH QIFRSI
Sbjct:  262 IFHKIKLVRETKVPRDKDMTLGELLKYKSQEGVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPSSSIYIMTVVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKDDFHNPTFPAGTK-APRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSI 536          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.319e-62
Identity = 122/250 (48.80%), Postives = 166/250 (66.40%), Query Frame = 2
Query:    2 VWHKVKLVRDAS---PALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADA---GYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNT--TGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ LVRD +   P  D TLGELL+ K+ EGVRVL+LVWDD TS  +L  K DG+M THDEET   F  + V  +LCPR      S+ +  ++ T++THHQK V+VD +    G  +R+I++F+GG+DLCDGRYD  +H LFRTL T+H DD+H P F G +   G PREPWHD+HS+++GP A+DVL NFE+RWRK          + G D L+R+  +P II I  +P +   D E+W+ Q+FRSI
Sbjct:  236 VYTEITLVRDTNRPKPGGDVTLGELLKRKASEGVRVLMLVWDDRTSVGLL--KKDGLMATHDEETANYFHGTDVNCVLCPRNPDDSGSFVQDLQISTMFTHHQKIVVVDHEMPNQGSQQRRIVSFIGGIDLCDGRYDTQYHSLFRTLDTVHHDDFHQPNFEGGSIKKGGPREPWHDIHSRLEGPIAWDVLYNFEQRWRK----------QGGKDLLVRLRDLPDII-IPPSPVMFPEDRETWNVQLFRSI 472          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.250e-62
Identity = 120/250 (48.00%), Postives = 168/250 (67.20%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDA---DAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNT--TGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ L+RD+    P  D TLGELL+ K+ EGVRVL+LVWDD TS  +L  K DG+M THDEET   F+++ V  +LCPR      S+ +  ++ T++THHQK V+VD+   +    RR+I++FVGGLDLCDGRYD+P H LFRTL + H DD+H P F G +   G PREPWHD+HS+++GP A+DVL NFE+RWRK          + G D L+++  +  +I I  +P +  +D E+W+ Q+FRSI
Sbjct:  232 VYTEISLIRDSRRPKPGGDITLGELLKKKASEGVRVLMLVWDDRTSVGLL--KKDGLMATHDEETEHFFQNTDVHCVLCPRNPDDGGSFVQDLQISTMFTHHQKIVVVDSAMPNGDSQRRRIVSFVGGLDLCDGRYDSPFHSLFRTLDSAHHDDFHQPNFAGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRK----------QGGKDLLIQLRELEDVI-IPPSPVMYPDDFEAWNVQLFRSI 468          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.250e-62
Identity = 122/251 (48.61%), Postives = 166/251 (66.14%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDAD----AGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ LVRD+    P  D T+GELL+ K+ EGVRVLLLVWDD TS  +L  K DG+M THDEET   F+ S V  +LCPR      S  +  ++ T++THHQK V+VD++     G   R+I++FVGG+DLCDGRYD P H LFRTL T+H DD+H P FTG   T G PREPWHD+HS+++GP A+DV+ NFE+RW K          + G D L+++  +  II I+ +P + + D + W+ Q+FRSI
Sbjct:  233 VYAEIALVRDSRRPKPGGDVTIGELLKKKASEGVRVLLLVWDDRTSVDVL--KKDGLMATHDEETENFFRGSDVHCILCPRNPDDGGSIVQSLQISTMFTHHQKIVVVDSEMPSRGGSEMRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTVHHDDFHQPNFTGAAITKGGPREPWHDIHSRLEGPIAWDVMYNFEQRWSK----------QGGKDILVKLRDLSDII-ITPSPVMFQEDHDVWNVQLFRSI 470          
BLAST of FC923657 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.939e-62
Identity = 123/251 (49.00%), Postives = 165/251 (65.74%), Query Frame = 2
Query:    2 VWHKVKLVRDA---SPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDAD----AGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGN--TTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAPKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHXQIFRSI 727
            V+ ++ LVRD+    P  D T+GELL+ K+ EGVRVLLLVWDD TS  +L  K DG+M THDEET   F+ S V  +LCPR      S  +  +V  ++THHQK V+VD++     G   R+I++FVGG+DLCDGRYD P H LFRTL T+H DD+H P FTG   T G PREPWHD+HS+++GP A+DVL NFE+RW K          + G D L+++  +  II I+ +P + + D + W+ Q+FRSI
Sbjct:  233 VYTEIALVRDSRRPKPGGDVTVGELLKKKASEGVRVLLLVWDDRTSVDVL--KKDGLMATHDEETENFFRGSDVHCILCPRNPDDGGSIVQNLQVSAMFTHHQKIVVVDSEMPSRGGSQMRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTVHHDDFHQPNFTGAAITKGGPREPWHDIHSRLEGPIAWDVLYNFEQRWSK----------QGGKDILVKLRELSDII-ITPSPVMFQEDHDVWNVQLFRSI 470          
The following BLAST results are available for this feature:
BLAST of FC923657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PLDB1_ARATH2.214e-11883.20Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH2.807e-10578.81Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH5.478e-10172.43Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH6.268e-9769.14Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH1.145e-9067.90Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH8.530e-7052.17Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDA1_MAIZE1.319e-6248.80Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_RICCO2.250e-6248.00Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_ARATH2.250e-6248.61Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA1_BRAOC2.939e-6249.00Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]

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Properties
Property NameValue
Genbank descriptionC31707E10EF StrClemenN Citrus clementina cDNA clone C31707E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923657 ID=FC923657; Name=FC923657; organism=Citrus clementina; type=EST; length=727bp
GGTTTGGCACAAAGTTAAACTGGTTCGGGATGCGAGTCCTGCATTAGATT
GCACCCTTGGGGAACTTCTAAGATCAAAGTCCCAGGAAGGAGTGAGAGTG
CTGCTTCTTGTTTGGGATGACCCTACTTCGAGGAGTATTTTGGGTTATAA
AATGGATGGAGTTATGCAAACCCATGATGAGGAAACACGTCGTGTTTTCA
AGCACTCGTCTGTGAAGGTGCTACTTTGTCCCCGCATTGCTGGAAAACGA
CATAGTTGGGCCAAACAAAAGGAAGTTGGAACAATCTACACGCACCATCA
GAAAACAGTAATTGTAGATGCTGATGCTGGTTATAATAGAAGGAAAATCA
TTGCTTTTGTTGGTGGCCTTGATTTATGTGATGGGCGATACGATAATCCA
CATCATCCTCTTTTTAGGACATTACAGACACTGCATAAGGACGACTATCA
CAATCCTACTTTCACGGGTAATACTACTGGTTGCCCACGAGAACCATGGC
ATGACTTGCATTCAAAAATTGATGGTCCAGCAGCATATGACGTTTTAACG
AACTTTGAGGAGCGTTGGCGAAAGGCTCCAAAACCTCACGGGATTAAGAA
ACTGAAGTCTGGGGATGATGCTTTGCTTAGGATAGAAAGAATTCCAGGCA
TTATAGGCATCTCTGATGCTCCTTCTGTTAGAGAGAATGATGCTGAATCT
TGGCATGNTCAGATTTTTCGTTCAATT
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