FC923664
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923664 vs. ExPASy Swiss-Prot
Match: TOM20_SOLTU (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74 Identity = 139/194 (71.65%), Postives = 152/194 (78.35%), Query Frame = 2 Query: 104 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFA 685 M+MQS+FDRLLFFEHARK+AE YA++PLDADNLTRWGGALLELSQFQ V +SK+MI DA SKLEEAL V+P +HD LWCLGNAHTSH FLTPD DEAK YF KAT FQQA D +PSN+LY+KSLEV AKAPELHMEIH+HG QQTM DLKYDIFGWVILAVGIVAWVGFA Sbjct: 1 MEMQSEFDRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQTM---AAEPSTSTSTKSSKKTKSSDLKYDIFGWVILAVGIVAWVGFA 191
BLAST of FC923664 vs. ExPASy Swiss-Prot
Match: TO203_ARATH (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.938e-56 Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 2 Query: 104 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFA 685 MD +++FDR+L FE R+ AE Y +PLDADNLTRWGG LLELSQF ++ D+K+MI +AI+K EEAL++ P + + +WC+GNA+TS AFLTPD+ EAK F+ AT +FQQAVDE+P N Y KSLE+ AKAP+LH E +K GLG Q M D KYD GWVILA+G+VAW+ FA Sbjct: 1 MDTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAYKQGLGSQPM--GRVEAPAPPSSKAVKNKKSSDAKYDAMGWVILAIGVVAWISFA 192
BLAST of FC923664 vs. ExPASy Swiss-Prot
Match: TO202_ARATH (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 7.236e-55 Identity = 101/198 (51.01%), Postives = 135/198 (68.18%), Query Frame = 2 Query: 116 SDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTM-----XXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFANPI 694 +DF+RL+ FEHARK +EA Y DPLD++NL +WGGALLELSQFQ +P++K M+ DAISKLEEAL ++P +H LWC+ NA+T+HAF D +EAKE+F+KAT YFQ+A +E+P N+ Y+KSL+ + KAPELHM+ G+GQQ + + YD+ GW+ILA GIVAWVG A + Sbjct: 6 ADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLDSSLKAPELHMQFMNQGMGQQILGGGGGGGGGGMASSNVSQSSKKKKRNTEFTYDVCGWIILACGIVAWVGMAKSL 203
BLAST of FC923664 vs. ExPASy Swiss-Prot
Match: TO204_ARATH (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.412e-50 Identity = 103/195 (52.82%), Postives = 129/195 (66.15%), Query Frame = 2 Query: 104 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAN 688 MDMQ++ +RL+ FEHARK AEA Y K+PLDA+NLTRW GALLELSQFQT P K+MIL+AI KL EAL++ P +HD LW +GNAH S FL+ DQ EA + F KA+ +FQ AV+E+P +ELY+KSL +A+KAPELH + KYD+FGWVILA +VAW+ FAN Sbjct: 1 MDMQNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQTEP--KQMILEAILKLGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLTLASKAPELHT--------------GGTAGPSSNSAKTMKQKKTSEFKYDVFGWVILASYVVAWISFAN 179
BLAST of FC923664 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSJ (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica GN=TOM20 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49 Identity = 99/194 (51.03%), Postives = 126/194 (64.95%), Query Frame = 2 Query: 104 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFA 685 M SD +R+ FF+ A + A+ Y ++P DADNLTRWGGALLELSQ + P+S K + DA SKLEEAL + P + D LWCLGNA TSH F T D +A E+F KAT FQ+AVD EP+N+LY+KSL++++KAPELHMEIH+ Q + D YD+FGWV+L VG+V WVG A Sbjct: 3 MGAMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQ----AASSTSNTRQSRKKKKDSDFWYDVFGWVVLGVGMVVWVGLA 192
BLAST of FC923664 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSI (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica GN=TOM20 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49 Identity = 99/194 (51.03%), Postives = 126/194 (64.95%), Query Frame = 2 Query: 104 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFA 685 M SD +R+ FF+ A + A+ Y ++P DADNLTRWGGALLELSQ + P+S K + DA SKLEEAL + P + D LWCLGNA TSH F T D +A E+F KAT FQ+AVD EP+N+LY+KSL++++KAPELHMEIH+ Q + D YD+FGWV+L VG+V WVG A Sbjct: 3 MGAMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQ-----AASSTSNTRQSRKKKDSDFWYDVFGWVVLGVGMVVWVGLA 191
BLAST of FC923664 vs. ExPASy Swiss-Prot
Match: TO201_ARATH (Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana GN=TOM20-1 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.975e-44 Identity = 96/191 (50.26%), Postives = 122/191 (63.87%), Query Frame = 2 Query: 125 DRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGL-----GQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGF 682 D+L FFE RK AE Y +P DADNL RWG ALLELSQFQ V DS KMI DAISKLE+A+++ P +HD +WCLGNA+TS+A LTPD +A+ F A L+F AV ++P N++Y KSLE+A KAP+LH HK+ L G +T+ D KY + GWVILA+G+VA + F Sbjct: 2 DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMADKAPQLHTGFHKNRLLSLLGGVETL--------AIPSPKVVKNKKSSDEKYIVMGWVILAIGVVACISF 184 The following BLAST results are available for this feature:
BLAST of FC923664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923664 ID=FC923664; Name=FC923664; organism=Citrus clementina; type=EST; length=697bpback to top |