FC923733

Overview
NameFC923733
Unique NameFC923733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length554
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2823 contig Ccv1_Contig2823:193..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_TRIVS (Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3)

HSP 1 Score: 332.798 bits (852), Expect = 6.730e-91
Identity = 154/179 (86.03%), Postives = 165/179 (92.18%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWANIL 537
            KEEFHRETC KIKALHQYDCLRANK+TSAWGLEARVPFLDK+F+N+AM+IDPE KMI P +GRIEKWILRKAFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKM+ NA +IFPHNTP TKE YYYRMIFERFFPQNSA+LTVPGG SVACSTA AV WDA W+  L
Sbjct:  361 KEEFHRETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFVNLAMSIDPEAKMIKPDQGRIEKWILRKAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMLNAGHIFPHNTPTTKEGYYYRMIFERFFPQNSAKLTVPGGPSVACSTATAVAWDASWSKNL 539          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_BRAOL (Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 6.299e-89
Identity = 148/177 (83.62%), Postives = 166/177 (93.79%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWAN 531
            K+EFH+ETC KIKALH+YDCLRANK+TSA+GLEARVPFLDK+FIN AM++DPE KMI P+EGRIEKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA ++V DKM+  A +IFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGG +VACSTAKAVEWDA W+N
Sbjct:  362 KQEFHQETCRKIKALHKYDCLRANKATSAFGLEARVPFLDKEFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAENVNDKMMSKAAFIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSN 538          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_ARATH (Asparagine synthetase [glutamine-hydrolyzing] OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 6.299e-89
Identity = 150/177 (84.75%), Postives = 165/177 (93.22%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWAN 531
            K+EFH+ETC KIKALH+YDCLRANKSTSA+GLEARVPFLDKDFIN AM++DPE KMI P+EGRIEKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLK HA Q+V DKM+ NA +IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGG +VACSTAKAVEWDA W+N
Sbjct:  361 KKEFHQETCRKIKALHKYDCLRANKSTSAFGLEARVPFLDKDFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAQNVNDKMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSN 537          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_ASPOF (Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 1.403e-88
Identity = 149/179 (83.24%), Postives = 163/179 (91.06%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWANIL 537
            KEEFH ETC KIKALHQYDCLRANK+TSAWGLEARVPFLDK+F++VAM+IDPE KMI P  GRIEKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTD+M+ NA  I+PHNTP TKEAYYYRMIFERFFPQNSAR TVPGG S+ACSTAKA+EWDA W+N L
Sbjct:  361 KEEFHHETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFMDVAMSIDPESKMIKPDLGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDRMMLNAARIYPHNTPTTKEAYYYRMIFERFFPQNSARFTVPGGPSIACSTAKAIEWDARWSNNL 539          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS1_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2)

HSP 1 Score: 323.168 bits (827), Expect = 5.333e-88
Identity = 153/179 (85.47%), Postives = 163/179 (91.06%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWANIL 537
            KEEFH ETC KIKALHQYDCLRANKST AWGLEARVPFLDK+FINVAM IDPE+KMI   EGRIEK+ILR+AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HVTDKM+ NA  IF HNTPLTKEAYYYRMIFERFFPQNSARLTVPGG +VACSTAKAVEWDA W+N L
Sbjct:  361 KEEFHTETCRKIKALHQYDCLRANKSTFAWGLEARVPFLDKEFINVAMNIDPEYKMIKRDEGRIEKYILRRAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAKHVTDKMILNAGNIFRHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNL 539          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS2_PEA (Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3)

HSP 1 Score: 320.087 bits (819), Expect = 4.514e-87
Identity = 154/179 (86.03%), Postives = 160/179 (89.39%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWANIL 537
            KEEFH ETC KIKALHQYDC RANKST AWGLEARVPFLDK FINVAM IDPE KMI   EGRIEK+ILRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTDKM+ NA  IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGG +VACSTAKAVEWDA W+N L
Sbjct:  361 KEEFHEETCRKIKALHQYDCQRANKSTYAWGLEARVPFLDKAFINVAMNIDPENKMIKRDEGRIEKYILRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDKMMLNAGNIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNL 539          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS1_PEA (Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3)

HSP 1 Score: 318.161 bits (814), Expect = 1.715e-86
Identity = 148/179 (82.68%), Postives = 160/179 (89.39%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWANIL 537
            +EEFH+ETC KIKALH+YDCLRANKST AWGLEARVPFLDKDFI VAM IDPE+KMI   EGRIEKWILRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDG+K HA +HVTD+M+ NA +IFP NTP TKEAYYYRMIFERFFPQNSARLTVPGG SVACST KA+EWDA W+N L
Sbjct:  362 REEFHQETCRKIKALHRYDCLRANKSTYAWGLEARVPFLDKDFIKVAMDIDPEFKMIKHDEGRIEKWILRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGIKDHAAKHVTDRMMFNASHIFPFNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPSVACSTEKAIEWDASWSNNL 540          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_ORYSJ (Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 313.153 bits (801), Expect = 5.518e-85
Identity = 142/179 (79.33%), Postives = 159/179 (88.83%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWANIL 537
            K+EFH ETC KIKALH YDCLRANKSTSAWG+EARVPFLDK+FINVAM IDPEWKMI    GRIEKW+LR AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HV+D M+ NA +++P NTP+TKEAYYYR IFE+FFP+N+ARLTVPGG SVACSTAKAVEWDA W+  L
Sbjct:  361 KKEFHEETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKNFINVAMDIDPEWKMIKRDLGRIEKWVLRNAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANEHVSDSMMMNASFVYPENTPVTKEAYYYRTIFEKFFPKNAARLTVPGGPSVACSTAKAVEWDAAWSKNL 539          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS2_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 2.739e-84
Identity = 145/179 (81.01%), Postives = 157/179 (87.71%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEWANIL 537
            KEE H+ETC KIKALH+YDCLRANKST AWGLEARVPFLDK FI+VAM IDPE KMI   EGRIEKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDGLK HA +HVTDKM+ NA  I+P NTP TKEAYYYRMIFERFFPQNSARL+VPGG S+ACST KA+EWDA W+N L
Sbjct:  361 KEELHQETCSKIKALHKYDCLRANKSTYAWGLEARVPFLDKKFIDVAMGIDPENKMIKRDEGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGLKDHAAKHVTDKMMLNASNIYPFNTPNTKEAYYYRMIFERFFPQNSARLSVPGGASIACSTEKAIEWDAAWSNNL 539          
BLAST of FC923733 vs. ExPASy Swiss-Prot
Match: ASNS_MAIZE (Asparagine synthetase [glutamine-hydrolyzing] OS=Zea mays GN=ASN1 PE=2 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 6.115e-76
Identity = 129/175 (73.71%), Postives = 148/175 (84.57%), Query Frame = 1
Query:    1 KEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGVSVACSTAKAVEWDAEW 525
            K+EF  ETC KIKALH YDCLRANK+TSAWG+EARVPFLDK FI+VAM IDPEW MI    GRIEKW++RKAFDD+E PYLPKH+LYRQKEQFSDGVGY+WIDGLK+  EQ VTD+M+ NA  +FP+NTP+ KEAYYYRMIFER FPQ+SAR TVP G S+ACST  A+EW  +W
Sbjct:  361 KKEFLEETCRKIKALHLYDCLRANKATSAWGVEARVPFLDKSFISVAMDIDPEWNMIKRDLGRIEKWVMRKAFDDDEHPYLPKHILYRQKEQFSDGVGYNWIDGLKSFTEQQVTDEMMNNAAQMFPYNTPVNKEAYYYRMIFERLFPQDSARETVPWGPSIACSTPAAIEWVEQW 535          
The following BLAST results are available for this feature:
BLAST of FC923733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_TRIVS6.730e-9186.03Asparagine synthetase [glutamine-hydrolyzing] OS=T... [more]
ASNS_BRAOL6.299e-8983.62Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_ARATH6.299e-8984.75Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS_ASPOF1.403e-8883.24Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS1_LOTJA5.333e-8885.47Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS2_PEA4.514e-8786.03Asparagine synthetase, root [glutamine-hydrolyzing... [more]
ASNS1_PEA1.715e-8682.68Asparagine synthetase, nodule [glutamine-hydrolyzi... [more]
ASNS_ORYSJ5.518e-8579.33Asparagine synthetase [glutamine-hydrolyzing] OS=O... [more]
ASNS2_LOTJA2.739e-8481.01Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_MAIZE6.115e-7673.71Asparagine synthetase [glutamine-hydrolyzing] OS=Z... [more]

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Properties
Property NameValue
Genbank descriptionC31708D03EF StrClemenN Citrus clementina cDNA clone C31708D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923733 ID=FC923733; Name=FC923733; organism=Citrus clementina; type=EST; length=554bp
AAGGAAGAATTCCACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCA
GTATGATTGCTTGAGAGCTAACAAATCAACATCTGCTTGGGGTCTAGAAG
CACGAGTCCCCTTCCTTGACAAAGATTTTATTAATGTAGCAATGGCCATT
GATCCTGAGTGGAAGATGATTAATCCTCAAGAAGGACGTATCGAGAAGTG
GATCCTTAGGAAGGCCTTCGATGATGAGGAGCGACCTTATCTGCCAAAGC
ATGTTCTGTACAGACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGT
TGGATTGATGGCCTCAAAGCACATGCTGAACAACATGTGACTGATAAAAT
GGTGCAAAATGCTCAATACATCTTCCCACACAACACACCTTTGACTAAAG
AAGCCTACTACTACAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCA
GCCAGGCTAACTGTCCCAGGAGGTGTGAGTGTAGCATGCAGCACGGCTAA
AGCTGTCGAATGGGATGCTGAGTGGGCAAATATCTTGATCCTTCTGGGAG
GGCT
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