FC923777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923777 vs. ExPASy Swiss-Prot
Match: PPCS_HUMAN (Phosphopantothenate--cysteine ligase OS=Homo sapiens GN=PPCS PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.825e-40 Identity = 89/189 (47.09%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 171 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFFECFEVTKESAVQVCQPYSE-----AVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMVAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDIQLLQVPKMLSVLREEWAP 722 RRV VTSGGT VPLE R VR++DNFSSG RGA S E + GY V+FLYR + PY P + + + + +E A+R + A A G L + FTT+ +YL +LQ A + LGP +MFYLAAAVSDFYVP M EHKIQS GPL I + VPK+LS L ++WAP Sbjct: 35 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLAVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFYVPVSEMPEHKIQSSGGPLQITMKMVPKLLSPLVKDWAP 223
BLAST of FC923777 vs. ExPASy Swiss-Prot
Match: PPCS_MOUSE (Phosphopantothenate--cysteine ligase OS=Mus musculus GN=Ppcs PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.055e-40 Identity = 86/189 (45.50%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 171 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFFECFEVTKES-----AVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMVAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDIQLLQVPKMLSVLREEWAP 722 RRV +TSGGT VPLE R VR++DNFSSG RGAAS E + GY V+FLYR + PY P A+ + + +++ + A++ + A A G L + FTT+ +YL +LQ A++ LG +MFYLAAAVSDFY+P M EHKI S GPL I + VPKMLS L ++WAP Sbjct: 35 RRVVLITSGGTKVPLEARAVRFLDNFSSGRRGAASAEVFLAAGYGVLFLYRARSAFPYAHRFPPQAWLSALRPSGPAQSGKLSLEAEENALPGFAAALQSYQEAAAAGTFLAVEFTTLADYLHLLQAAALALSPLGSSAMFYLAAAVSDFYIPVSEMPEHKIHSSGGPLQITMKMVPKMLSPLVKDWAP 223
BLAST of FC923777 vs. ExPASy Swiss-Prot
Match: YJ2I_SCHPO (Uncharacterized protein C4B3.18 OS=Schizosaccharomyces pombe GN=SPCC4B3.18 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.708e-38 Identity = 93/227 (40.97%), Postives = 134/227 (59.03%), Query Frame = 3 Query: 54 PLNSEIESFFDSAPPLNDRAAISEKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSL--PDDAFFECFEVTKESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMVAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSG--PLDIQLLQVPKMLSVLREEWAP 722 P + FF+ P N +S +++FI L +S ++ +A VTSGGT VPLEQ VR+IDNFS+G+RGAAS E+ K GY+VIFLYR + P+ P FE ++E V Q + V A+ + L+ +P+TT+ EYL L+ +A + + ++FYLAAAVSDF++P K ++EHKIQSGSG L++++ VPK L L + WAP Sbjct: 2 PEMDKSNDFFEENPCPNSLGDVSSLIEDFINL---QSNSQNIAFVTSGGTLVPLEQNTVRFIDNFSAGNRGAASAEYFCKSGYSVIFLYRNYSLMPFTRRYEGPWTNLFERSNGSQEKPWIVKQEFQSTVFNALNELDTYTKHHRLIMIPYTTLTEYLWYLKAIAERLQIIASRALFYLAAAVSDFHIPPKELSEHKIQSGSGSNKLEVKMHPVPKFLRFLVDTWAP 225
BLAST of FC923777 vs. ExPASy Swiss-Prot
Match: YII3_YEAST (Uncharacterized protein YIL083C OS=Saccharomyces cerevisiae GN=YIL083C PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 90/240 (37.50%), Postives = 125/240 (52.08%), Query Frame = 3 Query: 63 SEIESFFDSAPPLNDRAAISEKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFFECFEVTKESAVQVCQPYSEAV--KRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMVAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSG-------------------SGPLDIQLLQVPKMLSVLREEWA 719 +E E +F + P + + KEFI L S ++ +TSGGTTVPLE VR+IDNFS+G RGA+S E + GY+VIFL+R + PY S + F +S ++ ++E V + + D + LLL LPFTT+ +YL L+ +A + G +FYLAAAVSDF+VP+ + +HKIQSG G L + L VPK L L E WA Sbjct: 38 TEEEQYFKTNPKPAYIDELIKDAKEFIDLQYSLK-RNKIVLITSGGTTVPLENNTVRFIDNFSAGTRGASSAEQFLANGYSVIFLHREFSLTPYNRSF-SHSINTLFLDYIDSEGKIKPEFAENVLKNKKLYDKYMEKEEKLLL-LPFTTVNQYLWSLKSIAKLLNNSG--CLFYLAAAVSDFFVPYSRLPQHKIQSGDNGKMGANNDTEGTTRTTPDGKLIVNLDPVPKFLRRLVESWA 272 The following BLAST results are available for this feature:
BLAST of FC923777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923777 ID=FC923777; Name=FC923777; organism=Citrus clementina; type=EST; length=722bpback to top |