FC923782

Overview
NameFC923782
Unique NameFC923782
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length760
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10177 contig Ccv1_Contig10177:85..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: YGI3_SCHPO (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe GN=SPBC2A9.03 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.959e-19
Identity = 66/205 (32.20%), Postives = 103/205 (50.24%), Query Frame = 1
Query:  127 LNRVQISTMAVKDNLMVAGGFHGELICKYLDQPGVAFCTNLTTDDNAITNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTE 741
            L +  IS +   + +   G  +G+  C +  + G +F T   +DD+   N + +F      K+ I   ND  V + D +  S +  +    +VN   +  +  L  V  DS + ++ D +S  V+  L  H D     +WHP+G ILA+G QDTT ++WDIR L +S   L   M A+  L F+  G  LA+ E ADFV +FDT+
Sbjct:  178 LQKKAISCLDTTNAVGCLGTLYGQY-CIFNFKNG-SFSTRKLSDDSI--NHIQLF----SEKKFILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPLALVCTDSKDAMLIDIRSNSVSAKLP-HSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGKSFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTK 373          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.519e-14
Identity = 46/147 (31.29%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  310 KRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            +RV + ++D  ++I+DA + +C      +   V + + SPDG+ +A   D     I DA SG  T  L+GH     + A+ PDG+ +ASG+ D T ++WD  + + + T L+G+ G++ ++ F+ DG+ +A       + ++DT SG
Sbjct:  896 ERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQT-LEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASG 1041          

HSP 2 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 48/152 (31.58%), Postives = 88/152 (57.89%), Query Frame = 1
Query:  295 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            SP+G +RV + + D  ++I+DA + +C      +   V++ + SPDG+ +A         I DA SG  T  L+GH  +  + A+ PDG+ +ASG+ D T ++WD  + + + T L+G+ G ++++ F+ DG+ +A     + + ++DT SG
Sbjct: 1102 SPDG-QRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQT-LEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASG 1251          

HSP 3 Score: 75.485 bits (184), Expect = 3.578e-13
Identity = 48/152 (31.58%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  295 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            SP+G +RV + ++D  ++I+D  + +C      +   V +   SPDG+ +A   D     I DA SG  T  L+GH D  ++ A+ PDG+ +ASG+ D T ++WD  + + + T L+G+ G + ++ F+ DG+ +A       + ++D  SG
Sbjct: 1018 SPDG-QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQT-LEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASG 1167          

HSP 4 Score: 71.2478 bits (173), Expect = 6.747e-12
Identity = 46/160 (28.75%), Postives = 87/160 (54.37%), Query Frame = 1
Query:  271 TNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            ++ + V  SP+G +RV + + D  ++I+D  + +C      +  SV + + SPDG+ +A   D     I D  SG  T  L+GH  +  +  + PDG+ +ASG+ D T ++WD  + + + T L+G+  ++ ++ F+ DG+ +A       + ++D  SG
Sbjct:  968 SSVLSVAFSPDG-QRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQT-LEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASG 1125          

HSP 5 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 53/187 (28.34%), Postives = 98/187 (52.41%), Query Frame = 1
Query:  217 DQPG-VAFCTNLTTDDNAITNTVD--------VFRSPNGSKRVIAANNDAKVRIFD-AENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            ++PG ++  + +  + NA T T++        V  S +G +RV + ++D  ++I+D A          +  SV + + SPD + +A   D     I DA SG  T  L+GH     + A+ PDG+ +ASG+ D T ++WD  + + + T L+G+  ++ ++ F+ DG+ +A       + ++DT SG
Sbjct:  815 EEPGWISTISVVEAEWNACTQTLEGHGSSVLSVAFSADG-QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQT-LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASG 999          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: YY46_ANASP (Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 1
Query:  295 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDWS-VNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            +P+GS  + + ++D  VR+++  +  CL  F    S VN+   +PDG +LA         + D  S K     +GH ++  + A++PDG +LASG+ D T RLW+I + S+ L   +G+   + ++ F+ DG  LA       V ++   SG
Sbjct: 1209 NPDGST-LASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG 1358          

HSP 2 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  271 TNTVD-VFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDWS-VNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            TN V+ V  +P+GS  + + + D  VR+++  +  CL+ F    S V++ + SPDG +LA   D     +    SG+      GH ++  +  + PDG ILASG+ D T RLW I +  + L  L+G+   + ++ F+ DG  LA       V +++  SG
Sbjct: 1284 TNWVNSVAFNPDGSM-LASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISS-GKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSG 1442          

HSP 3 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 55/159 (34.59%), Postives = 77/159 (48.43%), Query Frame = 1
Query:  295 SPNGSKRVIAAN--NDAKVRIFDAENFSCLNRFS--YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKC 759
            SPNG   V  AN  +D  VR++D  +  CL       +W VN  + SPDG  LA         + D  S K    L+GH  +  +  ++PDG  LASG+ D T RLW+I N S+ L   +G+   + ++ F  DG  LA       V ++D  S   KC
Sbjct: 1125 SPNG---VTLANGSSDQIVRLWDISSKKCLYTLQGHTNW-VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEI-NSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSS--KC 1276          

HSP 4 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 70/247 (28.34%), Postives = 109/247 (44.13%), Query Frame = 1
Query:   64 VLNVAKPIVPTIKRP-GLSAQSLNRV--QISTMAVKDNLMVAGG---FHGELICKYLDQPGVAFCTNLTTDDNAITNTVDVFRSPNGSKRVIAANNDAK----------VRIFDA----ENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTES 744
            +L+  +P++  I+   G +   +N V    +T+ VK N MV  G    H  +I        +  C N T  + A +    VF    GS   +A + D K          VR ++A    E  +C    S+   VN+   S DGK+LA   D     + D  SG+     KGH     +  + P+  +LASG+ D T RLWDI +  + L + +G+ G + ++ F  DG  LA       V ++D  S
Sbjct:  784 MLDDNEPLIKIIEATRGRTEDEVNYVGGNAATLLVKLNKMVLEGRDLSHTVIIGADFTNTSLR-CVNFTEANLAYS----VFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSW---VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISS-GECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISS 1021          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 43/152 (28.29%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  316 VIAANNDAKVRIFDAENFSCLNRFSYDW-----SVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDI---RNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            +++ + D K +I+D E   C      +       V + ++SPDG+L+A         + DAQ+G      +GHLD  ++ A+ PDG+ LASG+ D + +LWD+   R+ S+      G+   + ++ F+ DG +L        V  +D  +G
Sbjct:  384 IVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: PKWA_THECU (Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 1
Query:  247 LTTDDNAITNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS--YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            LTTD  A+     V  SP GS  +   + D  + ++D  +   L+      DW V   + SPDG LLA   D     + D  + +     +GH  Y    A+ PDG ++ASG++D T RLW++   ++   VLKG+   + A+ F+ DG  +A       + ++D  +G
Sbjct:  456 LTTDREAVA----VAFSPGGSL-LAGGSGDKLIHVWDVASGDELHTLEGHTDW-VRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEH-AVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATG 617          

HSP 2 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  295 SPNGSKRVIAANNDAKVRIFD---AENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            SP+G+  + + ++DA VR++D   AE  +     ++   V + + SPDG ++A         + +  +G     LKGH DY +A A+ PDG ++ASG++D T RLWD+    +   VL+     + +L F+ DG  L     +  VH++D  SG
Sbjct:  510 SPDGAL-LASGSDDATVRLWDVAAAEERAVFEGHTH--YVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVAT-GKERDVLQAPAENVVSLAFSPDGSMLVHGSDST-VHLWDVASG 658          

HSP 3 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 47/147 (31.97%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  295 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDW-SVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVF 732
            SP+GS  V + + D  +R++D       +       +V + + SPDG +L    DST  L  D  SG+     +GH D+  A A+ PDG +LASG+ D T RLWD+    +  T L+G+   + ++ F  +G  LA A     + ++
Sbjct:  594 SPDGSM-VASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLW-DVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVA-AQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: YQ95_SCHPO (Uncharacterized WD repeat-containing protein C18.05c OS=Schizosaccharomyces pombe GN=SPCC18.05c PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.956e-12
Identity = 37/132 (28.03%), Postives = 73/132 (55.30%), Query Frame = 1
Query:  310 KRVIAANNDAKVRIFDAENFS--CLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLA 699
            +R+++A++D ++ ++D +  +        +   VN+ S SPDG+ +A     +   + D ++GK    L+GH+   +  AW  D R+L S +QDTT ++WD+R+       L G+   + A+ ++ DG+ +A
Sbjct:  359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFD-LPGHEDQVFAVDWSPDGQRVA 489          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.956e-12
Identity = 44/152 (28.95%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  295 SPNGSKRVIAANNDAKVRIFDAENFSCLNRF-SYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            SP+G + + +A+ D  VR++D     C+     +   V +   SP+G+++A         I D Q GK    L GH ++ F  A+ PDG+ILAS + D T R+WD+ N  +   +  G+   + ++ F+ DG  +A       V +++ ++G
Sbjct: 1071 SPDG-QLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDV-NTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTG 1220          

HSP 2 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 50/164 (30.49%), Postives = 78/164 (47.56%), Query Frame = 1
Query:  274 NTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLN--RFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYVKC 759
            N +    SP G + +   + D  VR+++ ++   L   R   +W V     SPDG++LA  G      +   + G     L GH    F+ A+HPDG  LAS + D T +LWDI++    L  L G+   +R + F+ DG  LA +     + ++D   G  KC
Sbjct:  644 NILSAAFSPEG-QLLATCDTDCHVRVWEVKSGKLLLICRGHSNW-VRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQD-GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQG--KC 802          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.956e-12
Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 1
Query:   70 NVAKPIVPTIKRPGLSAQSLNRVQ------ISTMAVKDNLMVAGGFHGELICKYLDQPGVAFCTNLTTDDNAITNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMA 705
            N+    V T+++     Q  NR++      IS    +D   +A G   + I K   + G  F T L   ++A+ +   V  SP+G + + +  +D  ++++   + + L   + ++ +VNN   SPDGK LA         + D  SG++   L GH        + PDG+ +A+G++D T +LW  R   + L  L G+   + +L F+ DG+ LA A
Sbjct: 1046 NLKLATVTTLQQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTI-KLWSRDGRLFRT-LNGHEDAVYS---VSFSPDG-QTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWH-RQDGKLLKTLNGHQDWVNSLSFSPDGKTLASA 1257          

HSP 2 Score: 71.2478 bits (173), Expect = 6.747e-12
Identity = 55/205 (26.83%), Postives = 101/205 (49.27%), Query Frame = 1
Query:  103 RPGLSAQSLNRVQISTMAVK---DNLMVAGGFHGELICKYLDQPGVAFCTNLTTDDNAITNTVDVFRSPNGSKRVIAANNDAKVRIFDAENFSCLNRFS-YDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMA 705
            R G   ++LN  + +  +V    D   +A G   + I  +    G    T +T  +  + N   V+ SP+G K + +A++D  ++++D  +   L   + +   V     SPDG+ +A   +     +   Q GK+   L GH D+  + ++ PDG+ LAS + D T +LW I +  + +  LKG+  ++  + F+SDG+ +A A
Sbjct: 1101 RDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKT-ITGHEQTVNN---VYFSPDG-KNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIAD-GKLVKTLKGHNDSVWDVNFSSDGKAIASA 1299          

HSP 3 Score: 70.4774 bits (171), Expect = 1.151e-11
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 1
Query:  316 VIAANNDAKVRIFDAENFSCLNRF-SYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWD--IRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESGYV 753
            + +AN D  V+I+   +   L     +D  VN  + SPDGK LA         + +   GK    LKGH D  F  ++ PDG+I+AS + D T RLWD    NL +S   L  +   + ++ F  DG  LA       V ++ +  G++
Sbjct: 1419 IASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKS---LPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHL 1564          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.812e-12
Identity = 41/151 (27.15%), Postives = 74/151 (49.01%), Query Frame = 1
Query:  295 SPNGSKRVIAANNDAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGKLLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGRILASGNQDTTCRLWDIRNLSQSLTVLKGNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            SP+G + + + + D  ++I+  +         +   +N  S S D KL+    D     + D  SG+    LKGH +Y F   ++P G ++ASG+ D T R+W  RN   ++  + G+   + ++ F  DG +LA       V ++D+ +G
Sbjct:  116 SPDG-RYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARN-GNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTG 264          
BLAST of FC923782 vs. ExPASy Swiss-Prot
Match: YN19_SCHPO (Uncharacterized WD repeat-containing protein C577.09 OS=Schizosaccharomyces pombe GN=SPBC577.09 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.812e-12
Identity = 47/154 (30.52%), Postives = 71/154 (46.10%), Query Frame = 1
Query:  334 DAKVRIFDAENFSCLNRFSYDWSVNNTSVSPDGK--LLAVLGDSTECLIADAQSGKVTGNLKGHLDYSFASAWHPDGR-ILASGNQDTTCRLWDIRNLSQSLTVLK-------------GNMGAIRALKFTSDGRFLAMAEPADFVHVFDTESG 747
            D  ++++D         F+ +  + + + SP     L+A    S+   + D QSG  T +L GH     A  W P    +LASG+ D TCRLWDIR +S S   +               + G +  L +TSD R+LA     D + V++ ESG
Sbjct:  125 DHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESG 278          
The following BLAST results are available for this feature:
BLAST of FC923782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
YGI3_SCHPO1.959e-1932.20Uncharacterized WD repeat-containing protein C2A9.... [more]
HETE1_PODAN5.519e-1431.29Vegetative incompatibility protein HET-E-1 OS=Podo... [more]
YY46_ANASP2.739e-1330.92Uncharacterized WD repeat-containing protein alr34... [more]
TUP1_DICDI2.319e-1228.29General transcriptional corepressor tupA OS=Dictyo... [more]
PKWA_THECU3.029e-1230.18Probable serine/threonine-protein kinase pkwA OS=T... [more]
YQ95_SCHPO3.956e-1228.03Uncharacterized WD repeat-containing protein C18.0... [more]
Y2800_ANASP3.956e-1228.95Uncharacterized WD repeat-containing protein alr28... [more]
Y2124_ANASP3.956e-1227.40Uncharacterized WD repeat-containing protein all21... [more]
YZLL_CAEEL8.812e-1227.15Uncharacterized WD repeat-containing protein K04G1... [more]
YN19_SCHPO8.812e-1230.52Uncharacterized WD repeat-containing protein C577.... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31708H04EF StrClemenN Citrus clementina cDNA clone C31708H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923782 ID=FC923782; Name=FC923782; organism=Citrus clementina; type=EST; length=760bp
GTGTATCTGATGCAGAATTATTCTCTAATGCATTGGTCTTCATTGCTCCG
TAGAGGCAAAGAAGTGCTCAACGTGGCAAAGCCAATTGTTCCCACCATAA
AACGCCCTGGTTTGTCAGCTCAGTCTCTGAACAGAGTGCAAATAAGCACC
ATGGCAGTTAAAGATAATCTGATGGTGGCTGGTGGTTTTCATGGGGAGCT
TATCTGCAAGTACTTAGATCAACCTGGGGTTGCTTTCTGCACAAATTTAA
CAACAGATGATAATGCCATCACCAATACAGTGGATGTGTTCCGGAGCCCT
AATGGCTCGAAGAGGGTCATAGCAGCAAACAATGATGCCAAAGTTAGAAT
ATTTGACGCTGAAAATTTCAGTTGCCTTAATCGCTTCTCATATGATTGGT
CTGTGAATAATACCTCTGTTAGTCCAGATGGGAAGTTGCTTGCAGTACTT
GGGGACAGCACAGAGTGCTTGATAGCTGATGCTCAGTCTGGTAAAGTCAC
TGGGAACCTTAAAGGACACTTGGACTACTCATTTGCTTCAGCCTGGCACC
CGGATGGAAGAATTTTAGCCTCTGGGAACCAAGACACTACTTGCAGGCTG
TGGGACATAAGGAACTTATCGCAATCCCTGACTGTGTTGAAGGGAAATAT
GGGGGCCATTAGGGCTCTCAAGTTCACCTCCGACGGCCGGTTTCTGGCAA
TGGCTGAGCCAGCAGACTTTGTTCATGTATTTGATACAGAGTCTGGATAT
GTCAAGTGCC
back to top