FC924870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: LPAT2_BRAOL (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica oleracea GN=LPAT2 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 8.628e-67 Identity = 121/157 (77.07%), Postives = 132/157 (84.08%), Query Frame = 3 Query: 153 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 VPLG+LFFISGLVVNL+QAVC+V IRPLSKNTYR+INR AGVKI++F D ET+ MGKEHALVV NH+SDIDWLVGW+LAQRSGCLGS LAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRL D+P+PFW Sbjct: 10 VPLGILFFISGLVVNLLQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLNDFPRPFW 166
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: LPAT2_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.922e-66 Identity = 121/157 (77.07%), Postives = 130/157 (82.80%), Query Frame = 3 Query: 153 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 VPLGLLFFISGL VNL QAVC+V IRPLSKNTYR+INR AGVKI++F D ET+ MGKEHALVV NH+SDIDWLVGW+LAQRSGCLGS LAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRL D+P+PFW Sbjct: 9 VPLGLLFFISGLAVNLFQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADNETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLSDFPRPFW 165
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: LPAT2_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica napus GN=LPAT2 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 5.593e-66 Identity = 118/157 (75.16%), Postives = 132/157 (84.08%), Query Frame = 3 Query: 153 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 VPLG+LFFISGLVVNL+QAVC+V +RP+SKNTYR+INR AGVKI++F D ET+ MGKEHALVV NH+SDIDWLVGW+LAQRSGCLGS LAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTL+SGLQRL D+P+PFW Sbjct: 9 VPLGILFFISGLVVNLLQAVCYVLVRPMSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLQSGLQRLNDFPRPFW 165
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: LPAT_MAIZE (1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 OS=Zea mays GN=PLS1 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 3.393e-63 Identity = 113/157 (71.97%), Postives = 129/157 (82.17%), Query Frame = 3 Query: 153 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +PLGLLF +SGL+VN IQAV FVTIRP SK+ YRRINR AGVK++L D ETYR MGKEHAL++SNH+SDIDWL+GW+LAQRSGCLGSTLAVMKKSSKFLPVIGWSMWF+EYLFLER+WAKDE TLK GLQRL+D+P+PFW Sbjct: 10 LPLGLLFLLSGLIVNAIQAVLFVTIRPFSKSFYRRINRFLAELLWLQLVWVVDWWAGVKVQLHADEETYRSMGKEHALIISNHRSDIDWLIGWILAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFAEYLFLERSWAKDEKTLKWGLQRLKDFPRPFW 166
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: LPAT3_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=LPAT3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.576e-55 Identity = 94/157 (59.87%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 153 VPLGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +P+G+LF ISGL+VN+IQ V F+ +RP S++ YRRIN+ A +KI L+VD ET L+GKEHALV+SNH+SDIDWL+GWV+AQR GCLGS+LA+MKK +K+LP+IGWSMWFS+Y+FLER+WAKDE+TLK+G +RL D+P FW Sbjct: 10 IPVGVLFLISGLIVNIIQLVFFIIVRPFSRSLYRRINKNVAELLWLQLIWLFDWWACIKINLYVDAETLELIGKEHALVLSNHRSDIDWLIGWVMAQRVGCLGSSLAIMKKEAKYLPIIGWSMWFSDYIFLERSWAKDENTLKAGFKRLEDFPMTFW 166
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCC_PONAB (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Pongo abelii GN=AGPAT3 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.326e-29 Identity = 58/155 (37.42%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +G +F +SGLV+N +Q +C + + P+SK YRR+N + + LF D+ T GKEHA+++ NH +ID+L GW + +R G LGS+ + KK ++P+IGW+ +F E +F +R W +D T+ GL+RL DYP+ W Sbjct: 17 VGFVFVVSGLVINFVQ-LCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMW 170
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCC_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Homo sapiens GN=AGPAT3 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.326e-29 Identity = 58/155 (37.42%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 159 LGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +G +F +SGLV+N +Q +C + + P+SK YRR+N + + LF D+ T GKEHA+++ NH +ID+L GW + +R G LGS+ + KK ++P+IGW+ +F E +F +R W +D T+ GL+RL DYP+ W Sbjct: 17 VGFVFVVSGLVINFVQ-LCTLALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMW 170
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCC_MOUSE (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Mus musculus GN=Agpat3 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27 Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 159 LGLLFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +G +F +SGL++N Q +C + + P+SK+ YRRIN + + LF D+ T GKEH +V+ NH +ID+L GW + +R G LGS+ + K+ +P+IGW+ +F E +F +R W +D T+ GL+RL DYP+ W Sbjct: 17 IGFVFVVSGLIINFTQ-LCTLALWPISKHLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHVVVILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDTVIEGLRRLADYPEYMW 170
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCD_BOVIN (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Bos taurus GN=AGPAT4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.332e-26 Identity = 55/152 (36.18%), Postives = 88/152 (57.89%), Query Frame = 3 Query: 168 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +F +SGL++N IQ +C + + P++K +R+IN +G + ++ D Y GKE+A+VV NHK +ID+L GW LA+R G LG + + KK ++P+IGW +F+E +F R W +D T+ L LRDYP+ ++ Sbjct: 20 VFIVSGLIINTIQ-LCTLLLWPVNKQLFRKINCRLSYCVSSQLVMLLEWWSGTECVIYTDPRAYPKYGKENAIVVLNHKFEIDFLCGWSLAERFGVLGGSKVLAKKELAYVPIIGWMWYFTEMVFCTRKWEQDRKTVSESLLHLRDYPEKYF 170
BLAST of FC924870 vs. ExPASy Swiss-Prot
Match: PLCD_PONAB (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Pongo abelii GN=AGPAT4 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25 Identity = 55/152 (36.18%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 168 LFFISGLVVNLIQAVCFVTIRPLSKNTYRRINRXXXXXXXXXXXXXXXXXAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLRDYPQPFW 623 +F SGL++N IQ + + P++K +R+IN +G + +F D Y GKE+A+VV NHK +ID+L GW L++R G LG + + KK ++P+IGW +F+E +F R W +D T+ + LQ LRDYP+ ++ Sbjct: 20 VFIASGLIINTIQLFTLL-LWPINKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYF 170 The following BLAST results are available for this feature:
BLAST of FC924870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924870 ID=FC924870; Name=FC924870; organism=Citrus clementina; type=EST; length=623bpback to top |