FC924898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57 Identity = 108/134 (80.60%), Postives = 117/134 (87.31%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGMGVAD S TFLEL+RKKVHRYVIFKID TGGPAES+D+F A+LPENDCRYAVYDFDFVTSENCQKSKIFFIAWSP SRIRAKMLYATSK+RF REL+G+HYEIQATDPTEMDLEVLR+RA+ Sbjct: 10 SGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.270e-56 Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGMGVAD+S TTFLELQRKK HRYV+FKID TG P ESYDDF ASLP+NDCRYAVYDFDFVTSENCQKSKIFF AWSPS S IRAK+LY+TSKD+ +REL+GIHYEIQATDPTE+DLEVLR+RAN Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.336e-52 Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SG+GVA + TFLELQRKK HRYVIFKID TG ES+DDF SLPE+DCRYA+YDFDFVT ENCQKSKIFF+AWSPSVSRIRAKMLYATSK+RF REL+G+HYEIQATDP+E+D+E+LR+RA+ Sbjct: 12 SGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.331e-49 Identity = 98/134 (73.13%), Postives = 106/134 (79.10%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGMGVA TFLELQ KK RYVIFKI+ TG ESYDDF ASLPENDCRYA+YDFDFVT EN QKSKIFFIAWSPS SRIRAKMLY+TSKDR +EL+G HYEIQATDPTE+DLEVLR+RA+ Sbjct: 12 SGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.007e-46 Identity = 87/130 (66.92%), Postives = 105/130 (80.77%), Query Frame = 3 Query: 15 VADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 V ++S + F EL+R+KVHRYVIFKID TG P ESYDDFTASLP +DCRYAVYD DFV+ +NC+KSKIFFI+WSPSVSRIRAK +YA S+++F EL+G+H+EIQATDP +MDLEVLR RAN Sbjct: 20 VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.091e-43 Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGM V D FLEL+ K+ HR++++KI+ G P ESY+DF ASLPEN+CRYAVYDFDFVT+ENCQKS+IFFIAW P +R+R+KM+YA+SKDRF REL+GI E+QA DPTEM L+V++ RAN Sbjct: 6 SGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.861e-43 Identity = 79/134 (58.96%), Postives = 103/134 (76.87%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGM V D+ FLEL+ K+ +R+++FKID G P E+YDDFT+S+P+++CRYAVYDFDF T +NCQKSKIFFIAWSP SR+R+KMLYA+SKDRF RE+EGI E+QATDP+EM L++++ R N Sbjct: 6 SGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.175e-43 Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGM V D+ FLEL+ K+ +R++I+KID G P +YDDF ASLP N+CRYA++D+DFVT ENCQKSKIFFIAWSP SR+R+KM+YA+SKDRF REL+GI E+QATDPTE+ L+V+R RAN Sbjct: 6 SGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.416e-43 Identity = 79/134 (58.96%), Postives = 103/134 (76.87%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGM V+D+ FLEL+ K+ +R+++FKID G P E+Y+DFT S+PE++CRYAVYD+DF T ENCQKSKIFFIAWSP SR+R+KMLYA+SKDRF REL+GI E+QATDP+EM L++++ R N Sbjct: 6 SGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139
BLAST of FC924898 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 7.073e-43 Identity = 79/134 (58.96%), Postives = 102/134 (76.12%), Query Frame = 3 Query: 3 SGMGVADQS*TTFLELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFTRELEGIHYEIQATDPTEMDLEVLRDRAN 404 SGM V D FLEL+ K+ HR++++KI+ G P +Y+DF ASLP ++CRYA+YDFDFVT+ENCQKSKIFFIAW P V+++R+KM+YA+SKDRF REL+GI E+QATDPTEMDL+VL+ R N Sbjct: 6 SGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139 The following BLAST results are available for this feature:
BLAST of FC924898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924898 ID=FC924898; Name=FC924898; organism=Citrus clementina; type=EST; length=642bpback to top |