FC924921

Overview
NameFC924921
Unique NameFC924921
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length615
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14578 contig Ccv1_Contig14578:1..615. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: APTH1_CRYNE (Acyl-protein thioesterase 1 OS=Cryptococcus neoformans GN=CNF02430 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.775e-17
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDI-HEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGDSG    P+  +  S  F   KW  P AP  PV+ N+G  MPSWFDI H   +  S   DE  +L+ +++V  +I   V +GI  N + + GFSQGG
Sbjct:   20 VIFLHGLGDSGHGWLPVAKMLWS-SFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDKLDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGG 123          

HSP 2 Score: 26.1794 bits (56), Expect = 3.775e-17
Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  526 SSVGALTLASVLLYPRKLGGGAIFSGWVP 612
            S  GA+++ ++L   RKL G    S WVP
Sbjct:  120 SQGGAISVLNMLTTKRKLAGVVALSTWVP 148          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA1_HUMAN (Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.263e-15
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G         F        K+  P AP  PVT N    MPSWFDI  I ++  S +DES + +A +N+ A+ID+ V  GI  N + + GFSQGG
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDI--IGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGG 122          

HSP 2 Score: 24.2534 bits (51), Expect = 3.263e-15
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  526 SSVGALTLASVLLYPRKLGGGAIFSGWVP 612
            S  GAL+L + L   +KL G    S W+P
Sbjct:  119 SQGGALSLYTALTTQQKLAGVTALSCWLP 147          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA1_PONAB (Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.241e-15
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G         F        K+  P AP  PVT N    MPSWFDI  I ++  S +DES + +A +N+ A+ID+ V  GI  N + + GFSQGG
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIRSSHIKYICPHAPVRPVTLNMNMAMPSWFDI--IGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGG 122          

HSP 2 Score: 24.2534 bits (51), Expect = 4.241e-15
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  526 SSVGALTLASVLLYPRKLGGGAIFSGWVP 612
            S  GAL+L + L   +KL G    S W+P
Sbjct:  119 SQGGALSLYTALTTQQKLAGVTALSCWLP 147          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: APTH1_SCHPO (Acyl-protein thioesterase 1 OS=Schizosaccharomyces pombe GN=SPAC8E11.04c PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQG 452
            +++LHGLGDSG     +   +++  FK  KW FP+AP+ PVT N G  MP+W+DI+         +DE+ +L++   +H +ID  +A GI  + + + GFSQG
Sbjct:   20 VIFLHGLGDSGQGWSFMANTWSN--FKHIKWIFPNAPSIPVTVNNGMKMPAWYDIYSF--ADMKREDENGILRSAGQLHELIDAELALGIPSDRILIGGFSQG 118          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA1_RABIT (Acyl-protein thioesterase 1 OS=Oryctolagus cuniculus GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.307e-15
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G           SP  K   +  P AP  PVT N    MPSWFDI  + ++  S +DES + +A + V A+ID+ V  GI  N + + GFSQGG
Sbjct:   24 VIFLHGLGDTGHGWAEAFAGIKSPHIK---YICPHAPVMPVTLNMNMAMPSWFDI--VGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSNRIILGGFSQGG 122          

HSP 2 Score: 24.2534 bits (51), Expect = 9.307e-15
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  526 SSVGALTLASVLLYPRKLGGGAIFSGWVP 612
            S  GAL+L + L   +KL G    S W+P
Sbjct:  119 SQGGALSLYTALTTQQKLAGVTALSCWLP 147          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA1_MOUSE (Acyl-protein thioesterase 1 OS=Mus musculus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.307e-15
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G           SP  K   +  P AP  PVT N    MPSWFDI  + ++  S +DES + +A + V A+ID+ V  GI  N + + GFSQGG
Sbjct:   24 VIFLHGLGDTGHGWAEAFAGIKSPHIK---YICPHAPVMPVTLNMNMAMPSWFDI--VGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSNRIILGGFSQGG 122          

HSP 2 Score: 24.2534 bits (51), Expect = 9.307e-15
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  526 SSVGALTLASVLLYPRKLGGGAIFSGWVP 612
            S  GAL+L + L   +KL G    S W+P
Sbjct:  119 SQGGALSLYTALTTQQKLAGVTALSCWLP 147          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA1_RAT (Acyl-protein thioesterase 1 OS=Rattus norvegicus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.572e-14
Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G         F   +    K+  P AP  PVT N   +MPSWFDI  I ++  S +DES + +A + V A+ID+ V  GI  N + + GFSQGG
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIKSSHIKYICPHAPVMPVTLNMSMMMPSWFDI--IGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSNRIILGGFSQGG 122          

HSP 2 Score: 24.2534 bits (51), Expect = 1.572e-14
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  526 SSVGALTLASVLLYPRKLGGGAIFSGWVP 612
            S  GAL+L + L   +KL G    S W+P
Sbjct:  119 SQGGALSLYTALTTQQKLAGVTALSCWLP 147          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA1_BOVIN (Acyl-protein thioesterase 1 OS=Bos taurus GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.653e-14
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G         F        K+  P AP  PVT N    MPSWFDI  I ++  S +DE+ + +A +NV A+ID+ V  GI  N + + GFSQGG
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIRSAHIKYICPHAPVMPVTLNMNMAMPSWFDI--IGLSPDSLEDETGIKQAAENVKALIDQEVKNGIPSNRIILGGFSQGG 122          

HSP 2 Score: 24.2534 bits (51), Expect = 2.653e-14
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 1
Query:  526 SSVGALTLASVLLYPRKLGGGAIFSGWVP 612
            S  GAL+L + L   +KL G    S W+P
Sbjct:  119 SQGGALSLYTALTTQQKLAGVTALSCWLP 147          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA2_RAT (Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G +     +    P     K+  P AP  PVT N   VMPSWFD+  + ++  +P+DE+ + KA +N+ A+I+  +  GI  N + + GFSQGG
Sbjct:   27 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGG 125          
BLAST of FC924921 vs. ExPASy Swiss-Prot
Match: LYPA2_MOUSE (Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  144 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVQNVHAMIDKGVAAGIDPNNVFVCGFSQGG 455
            +++LHGLGD+G +     +    P     K+  P AP  PVT N   VMPSWFD+  + ++  +P+DE+ + KA +N+ A+I+  +  GI  N + + GFSQGG
Sbjct:   27 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGG 125          
The following BLAST results are available for this feature:
BLAST of FC924921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
APTH1_CRYNE3.775e-1741.90Acyl-protein thioesterase 1 OS=Cryptococcus neofor... [more]
LYPA1_HUMAN3.263e-1541.35Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYP... [more]
LYPA1_PONAB4.241e-1541.35Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYP... [more]
APTH1_SCHPO7.423e-1538.83Acyl-protein thioesterase 1 OS=Schizosaccharomyces... [more]
LYPA1_RABIT9.307e-1541.35Acyl-protein thioesterase 1 OS=Oryctolagus cunicul... [more]
LYPA1_MOUSE9.307e-1541.35Acyl-protein thioesterase 1 OS=Mus musculus GN=Lyp... [more]
LYPA1_RAT1.572e-1441.35Acyl-protein thioesterase 1 OS=Rattus norvegicus G... [more]
LYPA1_BOVIN2.653e-1441.35Acyl-protein thioesterase 1 OS=Bos taurus GN=LYPLA... [more]
LYPA2_RAT1.072e-1338.46Acyl-protein thioesterase 2 OS=Rattus norvegicus G... [more]
LYPA2_MOUSE1.072e-1338.46Acyl-protein thioesterase 2 OS=Mus musculus GN=Lyp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YN15FM1 TF Citrus clementina cDNA clone KN0AAP6YN15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924921 ID=FC924921; Name=FC924921; organism=Citrus clementina; type=EST; length=615bp
AGAAATGCCGGGATGAATCGATGTTATTGACGAAACCGATCGTTCTATTT
ACGGTGATTTTGAGCGGCACCATTATATTCATTCTATTTTTCTGGCCGAG
TTCATCGTATTCACACGAACAAAATCCCATGGCTCGAAACTTTATATTGT
GGCTCCATGGCTTGGGTGACTCGGGTCCAGCCAATGAACCCATCAAAACT
CTCTTCACTTCTCCTGAGTTTAAACTCACCAAATGGTCCTTCCCTTCTGC
TCCTAACAACCCTGTTACTTGTAACTATGGTGCTGTGATGCCTTCATGGT
TTGACATTCATGAGATTCCTGTGACTGCTAGTTCTCCGAAAGATGAATCT
AGTTTGCTGAAAGCAGTTCAAAATGTGCATGCAATGATAGACAAGGGAGT
AGCTGCTGGGATAGATCCTAATAATGTTTTCGTCTGTGGATTTAGTCAAG
GAGGTCTTTCTTTCACACATGCAGAAAAAAGGAATTGCTGGTTTGCTATT
TTTATTGCCTCTTATATGAAGACTATCTTCTGTAGGTGCCTTAACTTTGG
CTAGTGTTCTGTTATACCCAAGAAAACTTGGAGGAGGTGCAATTTTTAGT
GGATGGGTTCCTTTT
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