FC924923

Overview
NameFC924923
Unique NameFC924923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC924923 vs. ExPASy Swiss-Prot
Match: BCCIP_ARATH (Protein BCCIP homolog OS=Arabidopsis thaliana GN=At2g44510 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19
Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 1 
Query:   49 KNNRNLKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLI 282
            KN +  K R   +  ++ V++KPEDE+F +LS WSF+FPM++Q V +QE+KNY+LMGLVMAVEA KIP FRQ L SLI
Sbjct:  248 KNPKQRKPRHGEEDIEDTVFLKPEDELFLELSSWSFTFPMRSQLVTSQEMKNYQLMGLVMAVEANKIPKFRQMLNSLI 325
The following BLAST results are available for this feature:
BLAST of FC924923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BCCIP_ARATH3.695e-1958.97Protein BCCIP homolog OS=Arabidopsis thaliana GN=A... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP6YN16FM1 TF Citrus clementina cDNA clone KN0AAP6YN16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924923 ID=FC924923; Name=FC924923; organism=Citrus clementina; type=EST; length=600bp
AAAATTTCTTCTTTGGATGCCAACCTAAAGCACAAGAATGCGAACCAGAA
AAATAACAGAAACCTGAAAAGGAGGTCCGCTAGTGACAGTGGTGATGAAA
TAGTGTACATCAAGCCAGAAGATGAAATTTTTCACAAGCTTAGCTTGTGG
TCCTTTAGTTTTCCCATGCAGACCCAGCAGGTTGAAACTCAGGAGCTAAA
AAATTATCGTTTGATGGGGTTAGTCATGGCCGTAGAGGCAGCCAAAATTC
CAACATTCCGCCAGGAGTTGCAATCTTTAATTGTTGAAACTTGAGATGTA
AAGGGTCATCATTTCAGTTAAGCTTTGACTTTTCTCCTCCTAAGACATCT
GCAACAGCTTTAAAACTTGCTGGCTTTTCTTATTTGCAGGGGTCTGGCTG
CCAACTTTGAACTTCAGATTCTTCCATATTTTTTTCTGGAGACACTAGAA
CAGCTATCTGTTTCAATAGGTACCAATTTTGTAACCACAGCAACTGTCAA
ACTACTTTCTTTCGACAATTTATAGCAATTTGAAATATGTTAATTCTTTT
TTATATAAAGCACGATTATGTTATTTGTTAAAAAAAAAAAAAAAAAAAAA
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