FC924932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VPS33_ARATH (Vacuolar protein sorting-associated protein 33 homolog OS=Arabidopsis thaliana GN=VPS33 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.605e-62 Identity = 117/155 (75.48%), Postives = 140/155 (90.32%), Query Frame = 1 Query: 4 VDGYASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKATSMKQDYTDV 468 VDG SS WHIAKAIH+LEF+FG+I +RAKGKASVRVA+ILNRMQ EEPV+ +D+ PE++TL+L+DREVDMVTPMCSQLTYEGL+DE L I+NG+VE+D+S+MGA QQ+GKKMKVPLNSSDKLFKE RDLNFEVVVQVL QKA +MK+DYT++ Sbjct: 164 VDGDVSSLWHIAKAIHELEFSFGVISKMRAKGKASVRVADILNRMQVEEPVNSNDVGRPEVDTLILLDREVDMVTPMCSQLTYEGLIDEILHISNGAVEVDSSVMGA-QQEGKKMKVPLNSSDKLFKETRDLNFEVVVQVLRQKAMTMKEDYTEI 317
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33A_RAT (Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus GN=Vps33a PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.795e-21 Identity = 58/153 (37.91%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 4 VDGYASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDG--------KKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKA 438 ++G +S +H AK + L+ +G IP + KG+ + +VA ++ RM+ E S + + P + L+L+DR VD++TP+ SQLTYEGL+DE I N V+L ++Q G + K+ LNS+++L+ EIRD NF V VL +KA Sbjct: 165 LEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKA 316
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33A_MOUSE (Vacuolar protein sorting-associated protein 33A OS=Mus musculus GN=Vps33a PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.345e-21 Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 1 Query: 4 VDGYASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDG---------KKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKA 438 ++G +S +H AK + L+ +G IP + KG+ + +VA ++ RM+ E S + + P + L+L+DR VD++TP+ SQLTYEGL+DE I N V+L ++Q G + K+ LNS+++L+ EIRD NF V VL +KA Sbjct: 165 LEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGSGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKA 317
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33A_HUMAN (Vacuolar protein sorting-associated protein 33A OS=Homo sapiens GN=VPS33A PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.999e-21 Identity = 59/152 (38.82%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 4 VDGYASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQ-DGKK------MKVPLNSSDKLFKEIRDLNFEVVVQVLPQKA 438 ++G +S +H AK + L+ +G IP + KG+ + +VA ++ RM+ E S + + P + L+L+DR VD++TP+ +QLTYEGL+DE I N V+L ++Q DG K K+ LNS+++L+ EIRD NF V VL +KA Sbjct: 165 LEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMIRMKREFTGSQNSI-FPVFDNLLLLDRNVDLLTPLATQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKA 315
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33B_BOVIN (Vacuolar protein sorting-associated protein 33B OS=Bos taurus GN=VPS33B PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.287e-19 Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 34 IAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKATSMKQDY 459 +A+A+H L +G PN G+ + E+ R++ EE PEI + L+DR+VD VT +CSQ+ YEGLVD+ RI GSV+ + + K +KV LN+ DK+F EIR+ +F V L QKA +++ Y Sbjct: 176 LAQALHLLSTLYGPFPNCYGIGRCAKMSYELWKRLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFNEIRNEHFSNVFGFLSQKARNLQAQY 312
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33B_HUMAN (Vacuolar protein sorting-associated protein 33B OS=Homo sapiens GN=VPS33B PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 53/142 (37.32%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 34 IAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKATSMKQDY 459 +A+A+H L +G PN G+ + E+ ++ EE PEI + L+DR+VD VT +CSQ+ YEGLVD+ RI GSV+ + + K +KV LN+ DK+F EIR+ +F V L QKA +++ Y Sbjct: 176 VAQALHLLSTLYGPFPNCYGIGRCAKMAYELWRNLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFNEIRNEHFSNVFGFLSQKARNLQAQY 312
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33B_RAT (Vacuolar protein sorting-associated protein 33B OS=Rattus norvegicus GN=Vps33b PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.743e-19 Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 34 IAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKATSMKQDY 459 +A+A+H L +G PN G+ + ++ +++ EE PEI + L+DR+VD VT +CSQ+ YEGLVD+ RI GSV+ + + K +KV LN+ DK+F EIR+ +F V L QKA +++ Y Sbjct: 176 VAQALHLLSTLYGPFPNCYGIGRCTKMSYDLWRKLEEEEDSETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFSEIRNEHFSNVFGFLSQKARNLQAQY 312
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33B_MOUSE (Vacuolar protein sorting-associated protein 33B OS=Mus musculus GN=Vps33b PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.743e-19 Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 34 IAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKATSMKQDY 459 +A+A+H L +G PN G+ + ++ +++ EE PEI + L+DR+VD VT +CSQ+ YEGLVD+ RI GSV+ + + K +KV LN+ DK+F EIR+ +F V L QKA +++ Y Sbjct: 176 VAQALHLLSTLYGPFPNCYGIGRCAKMSYDLWRKLEEEEDSETKGRK-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDDTFRIKCGSVDFGPEVTSSD----KSLKVLLNAEDKVFSEIRNEHFSNVFGFLSQKARNLQAQY 312
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VP33A_DROME (Vacuolar protein sorting-associated protein 33A OS=Drosophila melanogaster GN=car PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.077e-14 Identity = 50/168 (29.76%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 4 VDGYASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDA-----------------------SIMGAQQQDGKKMKVPLNSSDKLFKEIRDLNFEVVVQVLPQKA 438 VDG SS + A + +L+ +G IP + KG+ + RV E ++ +E +L + + ++ L+L+DR +D+++P+ +QLTYEGL+DEF I + L A S++G D +K + L+S ++L+ E+R+ +F V ++L +KA Sbjct: 166 VDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER-TLYNGDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDEFYGIRQNKLTLPAENFPSDGALPGGGGSGPRVEESQSLLG----DTEKKTILLHSGEQLYAELRNKHFNEVTKLLARKA 328
BLAST of FC924932 vs. ExPASy Swiss-Prot
Match: VPS33_SCHPO (Vacuolar protein sorting-associated protein 33 OS=Schizosaccharomyces pombe GN=vps33 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.598e-12 Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 43 AIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTL----VLIDREVDMVTPMCSQLTYEGLVDEFLRINNGSVELDASIMGAQQ--QDGKKMKVPL-NSSDKLFKEIRDLNFEVVVQVLPQKATSMKQDY 459 A+ E T G P V +G + ++ E+L + EE EI+ L +L+DR +D +TP +QLTY G +DE L I +V+L +S++ + G K L +SS ++ KEIRD+NF + L + A + D+ Sbjct: 160 ALIDFERTHGRFPRVSGRGPYAAKMLELLEKTYQEEATINFGKVEGEISALYDSVLLVDRSLDRITPFLTQLTYFGFLDEILGIQQMNVKLPSSLVNRNEASNTGPMKKFSLSSSSSQITKEIRDINFNCIGPYLSKIARKLSSDF 305 The following BLAST results are available for this feature:
BLAST of FC924932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924932 ID=FC924932; Name=FC924932; organism=Citrus clementina; type=EST; length=479bpback to top |