FC924938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.126e-31 Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 1 Query: 109 VGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 +G ++ TG L R GC++QG+Y + E+L+RH L D AP+V + F+AP+ASIIGDV +G+ SSIWY VLRGDVNSI IG T + D ++VH + + G PT IGD V +G +++H T+ E+F+G G+TL D Sbjct: 10 LGEVVKNTGLILHRTGCKMQGDYAYVEKLNRHTRLTAFGDNAPIVGQKSFIAPNASIIGDVVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLGP-KPTQIGDKVYIGPGSIVHAATILGESFIGTGSTLCD 151
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: Y304_METJA (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii GN=MJ0304 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.802e-21 Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 238 VVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATL 531 ++ K+V +A A I+GDV +G SS+WY V+RGDV+ I IG+ +NIQD +VH +K PTIIGD V++GH AV+HGC +ED VGM AT+ Sbjct: 1 MISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKG------YPTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATI 92
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: YRDA_SHIFL (Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.578e-17 Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 226 DKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVA-KSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 D P + + V + S+ +IGDV++ IW V+RGDV+ + IG+ TNIQD S++HV KS+ P IG++VTVGH +LHGCT+ + VGMG+ L D Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLD 114
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: YRDA_ECOLI (Protein yrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.578e-17 Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 226 DKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVA-KSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 D P + + V + S+ +IGDV++ IW V+RGDV+ + IG+ TNIQD S++HV KS+ P IG++VTVGH +LHGCT+ + VGMG+ L D Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLD 114
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: Y3753_PSEAE (Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa GN=PA3753 PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.578e-17 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 250 DVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATL 531 D ++APSA++IG V++ G+S+W+G VLRGD I IG +N+QD S++H P +G VTVGH+A+LHGC+V D + VG+ A + Sbjct: 15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMG------YPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVI 102
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: UMP7_ARATH (Uncharacterized protein At5g63510, mitochondrial OS=Arabidopsis thaliana GN=At5g63510 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.887e-16 Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 P V D ++AP+ + G V V GSS+W G VLRGD+N I++G +N+Q+ +VH A S+ G TII VTVG ++L CT+E E +G + L + Sbjct: 66 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILME 166
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: UMP8_ARATH (Uncharacterized protein At3g48680, mitochondrial OS=Arabidopsis thaliana GN=At3g48680 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16 Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 P V D ++AP+ + G V V GSS+W G VLRGD+N I++G +N+Q+ +VH A S+ G T+I VTVG ++L CT+E E +G + L + Sbjct: 70 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILME 170
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: PAAY_ECOLI (Phenylacetic acid degradation protein paaY OS=Escherichia coli (strain K12) GN=paaY PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.575e-15 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV ++ F+ P+A +IGDV +G+G + LRGD I + G NIQDN ++H T++G++ +GHSA+LHGC + A VGM A + D Sbjct: 11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQ------DTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMD 105
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: YTOA_BACSU (Uncharacterized transferase ytoA OS=Bacillus subtilis GN=ytoA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.206e-14 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 P + F+A +A+I GDV +G SSIW+ V+RGDV IG+ NIQD S +H + + +I D+ T+GH LH + A +GMG+ + D Sbjct: 10 PDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNK------TLLIEDDATIGHQVTLHSAVIRKNALIGMGSIILD 104
BLAST of FC924938 vs. ExPASy Swiss-Prot
Match: CAIE_ECO5E (Carnitine operon protein caiE OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=caiE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.106e-14 Identity = 41/101 (40.59%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 235 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLRD 537 PVV F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + + D Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMD 105 The following BLAST results are available for this feature:
BLAST of FC924938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924938 ID=FC924938; Name=FC924938; organism=Citrus clementina; type=EST; length=539bpback to top |