FC924941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 5.205e-81 Identity = 143/159 (89.94%), Postives = 154/159 (96.86%), Query Frame = 3 Query: 93 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 MGQQSLIYSFVARGTVILAEYTEF GNFTS+A+QCLQKLP++NNKFTYNCDGHTFNYL +NGFTYCVV +ESAGRQIP+AFLERVKEDFNKRYGGGKA+TA AN+LNKEFGSKLKEHMQYC DHPEEISKL+KVKAQV+EVKGVMMENIEKVLDRGEKI Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKI 159
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 5.205e-81 Identity = 146/165 (88.48%), Postives = 158/165 (95.76%), Query Frame = 3 Query: 78 VRVLR-MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +RV R MGQQ+LIYSFVARGTVIL EYTEF GNFT++A+QCLQKLP++NNKFTYNCDGHTFNYLVENGFTYCVVAVES GRQIP+AFLERVKEDFNKRYGGGKA TA AN+LN+EFGSKLKEHMQYCVDHP+EISKLAKVKAQV+EVKGVMMENIEKVLDRGEKI Sbjct: 60 LRVTRTMGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKI 224
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 5.205e-81 Identity = 145/159 (91.19%), Postives = 155/159 (97.48%), Query Frame = 3 Query: 93 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVENGFTYCVVAV+SAGRQIP+AFLERVKEDFNKRYGGGKAATA AN+LNKEFGSKLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 159
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 4.406e-80 Identity = 143/159 (89.94%), Postives = 155/159 (97.48%), Query Frame = 3 Query: 93 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVE+GFTYCVVAV+SAGRQIP++FLERVKEDFNKRYGGGKAATA AN+LNKEFGSKLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 159
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 7.795e-69 Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 3 Query: 93 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRG 560 M QQSL YSF+ARGTVIL E+T+F GNFTS+A+Q L+ LP++NNKFTYNCDGHTFN LVENGFTYCVVAV+SAGR+IP+AFLERVKEDF KRYGG KAAT AN+LNKEFGS LKEHMQYC+DHP+EIS LAK KAQVSEVK +MMENIEKVL RG Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARG 156
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 1.521e-64 Identity = 118/160 (73.75%), Postives = 138/160 (86.25%), Query Frame = 3 Query: 93 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNN-KFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 MGQ+S IYSFVARGT+ILAEYTEFTGNF SIA+QCLQKLP+++N KFTYNCD HTFN+LVE+G+ YCVVA +S +QI IAFLERVK DF KRYGGGKA+TA+A +LNKEFG +KEHM Y VDH EEI KL KVKAQVSEVK +M+ENI+K +DRGE + Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENL 160
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.168e-56 Identity = 107/178 (60.11%), Postives = 134/178 (75.28%), Query Frame = 3 Query: 93 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGG-------------------KAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 M Q+ LIYSFVA+GTV+LAE+T ++GNF++IA QCLQKLP ++K+TY+CDGHTFN+LV+NGF + VVA ES GR +P FLERVKEDF KRY +VA NL++EFG LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLDRGEKI Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKI 178
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 6.249e-26 Identity = 61/156 (39.10%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATN-NKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++Y+ VARGTV+L+E+T + N ++IA Q L+K+P N + +Y+ D + F+ +G T +A E+AGR+IP AFLE + + F + YG TA+A +N+EF L + + Y + P ++ ++K ++++V+GVM+ENI+KVLDRGE++ Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDP-NADRINRIKGEMNQVRGVMIENIDKVLDRGERL 155
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.429e-24 Identity = 59/157 (37.58%), Postives = 104/157 (66.24%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 ++I++ VARGTV+L+E++ + N +SI+ Q L+KLP +++ +Y+ D + F+ +G T +A E+AGR IP AFL+ + + F K YG +A A ++N EF L + M++ + P +++++K ++S+V+ VM+ENI+KVLDRGE++ Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERL 156
BLAST of FC924941 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 55/157 (35.03%), Postives = 100/157 (63.69%), Query Frame = 3 Query: 105 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANNLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 569 +++Y+ VARGTV+LAE++ TGN ++ + L+KL ++ + ++ D + F+ L +G T+ +A ++ GR++P ++LE + F K YG A A A +N EF L + M++ +P + L +V+ +VSE++ VM+ENIEK+++RG++I Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRI 156 The following BLAST results are available for this feature:
BLAST of FC924941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924941 ID=FC924941; Name=FC924941; organism=Citrus clementina; type=EST; length=575bpback to top |