FC925061

Overview
NameFC925061
Unique NameFC925061
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length826
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3671 contig Ccv1_Contig3671:5..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.384e-77
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 1
Query:   97 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 696
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.384e-77
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 1
Query:   97 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 696
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.807e-77
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 1
Query:   97 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 696
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 8.968e-77
Identity = 146/225 (64.89%), Postives = 175/225 (77.78%), Query Frame = 1
Query:   22 LITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 696
            LIT+ A+  +I FA           YDPSPLQD CVAI++ K+GVFVNGKFCKDPK A+AEDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVL  GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:    9 LITLSAL--VISFA---------EAYDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLEAKFRN 222          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.998e-76
Identity = 139/199 (69.85%), Postives = 163/199 (81.91%), Query Frame = 1
Query:  100 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 696
            DPSPLQD CVAI + K+GVFVNGKFCKDPK A+AEDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 222          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.096e-74
Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 1
Query:   31 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 690
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N+GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.432e-74
Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 1
Query:   31 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 690
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N+GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.442e-74
Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 1
Query:   31 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 690
            M+  Q LI FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ NIGK  A+A++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.092e-72
Identity = 134/198 (67.68%), Postives = 158/198 (79.80%), Query Frame = 1
Query:   97 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 690
            YDPSPLQD CVA+++   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EIL+V+EGTL VGFVTS+Q NN L SKVL  GD FVFPIG+IHFQ N+G+TNAVA++ L SQ PG ITIADAVFG+ P I P+ LAKAFQLD   VK L+ +F
Sbjct:   25 YDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARF 221          
BLAST of FC925061 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 4.035e-69
Identity = 126/222 (56.76%), Postives = 161/222 (72.52%), Query Frame = 1
Query:   25 ITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 690
            +T+K++ FL   ++           DPSPLQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EIL+V +GTL VGF++S+Q  N L +K LN GD FVFP GLIHFQFN+G T AVA +AL+SQ  G ITIA+ +FG+ P ++P+ LA+AFQ+D   V++LQ +F
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222          
The following BLAST results are available for this feature:
BLAST of FC925061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH1.384e-7770.50Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH1.384e-7770.50Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL119_ARATH1.807e-7770.50Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL113_ARATH8.968e-7764.89Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH1.998e-7669.85Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL118_ARATH1.096e-7462.73Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH1.432e-7462.73Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH2.442e-7462.73Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH5.092e-7267.68Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL18_ARATH4.035e-6956.76Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YA18FM1 TF Citrus clementina cDNA clone KN0AAP3YA18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925061 ID=FC925061; Name=FC925061; organism=Citrus clementina; type=EST; length=826bp
CTTGATTAAAGTTCCTGTTAATTAATCACCATGAAGGCAATTCAATTTCT
TATAGGTTTTGCTGTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCTATG
ACCCTAGCCCTCTTCAAGATATCTGTGTAGCCATCAATAACCCCAAGGAT
GGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGC
AGAAGATTTCTTCTTTTCCGGGCTTGGCAAGCCTGGAAACACAGCAAATC
GACTTGGTGTTGATGAAACAGATGCAAATGTGGAGCAAATTCCAGGACTC
AATACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATGGCCA
AAGGCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTCCTGG
AAGGAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAACACA
CTCATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAATTGG
TTTGATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCCTATT
CTGCTCTAAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGCGGTC
TTTGGAGCCAATCCTCCAATCAATCCCGATTTTCTTGCCAAGGCGTTCCA
GTTGGACCCGAAGACAGTGAAAGATCTTCAGCATAAGTTCATTAATGGCG
ATTAGGAGAAGGAATTAATGAGCTTTAATATAAATGGCCTCTTCACTAGT
GGCTTTATTGTTTTAGCTCCAGATTATCATATCTTAATTAATGTTAAAAA
AAAAGCTCTCTCATGAACCTCTCTTC
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