FC925090

Overview
NameFC925090
Unique NameFC925090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length786
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15480 contig Ccv1_Contig15480:216..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: AB17I_ARATH (ABC transporter I family member 17 OS=Arabidopsis thaliana GN=ABCI17 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.953e-82
Identity = 151/201 (75.12%), Postives = 174/201 (86.57%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLLSEAKHPMALRFLQLS 622
            GPSGSGKST LR+LNRLWEPP  TVFLDG DIT++DV++LRR+VGMLFQ+P LF+GTVADN+RYGP LRG+KL++ EVYK             KTGAE+SVGQAQRVALARTLANEPEVLLLDEPTSALDPIST+NIEDV+VKLKK+ G+T V+VSHSIKQIQ++AD+VCL+V+GEIVEVLKP  LS A HPMA RFLQLS
Sbjct:   62 GPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKKTGAELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTVIVSHSIKQIQKVADIVCLVVDGEIVEVLKPSELSHATHPMAQRFLQLS 262          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB1_THETN (Phosphate import ATP-binding protein pstB 1 OS=Thermoanaerobacter tengcongensis GN=pstB1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.234e-40
Identity = 87/182 (47.80%), Postives = 122/182 (67.03%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLK 565
            GPSG+GKST+L+ +NRL EP  G +F++G +  ++DV+ LRRK+GM+FQ P LFEGTV +NI  GP LRG+K  +   Y              K    +S G+AQRV++AR LAN PEVLLLDEPTS+LDP ST  IE+ L+K   + G+ +++V+H+++Q +RI D    L  GE++E  K
Sbjct:   35 GPSGAGKSTMLKLINRLIEPTEGAIFINGVEYKNIDVILLRRKIGMVFQRPFLFEGTVKENIELGPSLRGEKNIDALFY--LEAVGLSKDYLFKDVNNLSGGEAQRVSIARALANSPEVLLLDEPTSSLDPTSTSIIEE-LIKRLNREGIMVILVTHNMEQAKRIGDYTLFLYKGELIEARK 213          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB2_THETN (Phosphate import ATP-binding protein pstB 2 OS=Thermoanaerobacter tengcongensis GN=pstB2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.488e-38
Identity = 91/191 (47.64%), Postives = 125/191 (65.45%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI-TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG--KKLTENEVY----KXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKST +R LNR+ +       SGTV LDG+DI  ++DV+ LR+KVGM+FQ P  F  TV DN+ YGP++ G   K T NE+     K              +   +S GQ QR+ +ARTLA EPEV+L+DEPTSALDPIST  IE+++ +LKKK+  TI++V+H+++Q  R++D     +NGE+VE
Sbjct:   36 GPSGCGKSTFIRTLNRMNDLIEGVKISGTVLLDGKDIYKEVDVIELRKKVGMVFQKPNPFPMTVYDNVAYGPRIHGIRDKRTLNEIVEKSLKAAALWDEVKDRLHHSALSLSGGQQQRLCIARTLAVEPEVILMDEPTSALDPISTMKIEELIEELKKKY--TIIIVTHNMQQAGRVSDYTAFFLNGELVE 224          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_METBU (Phosphate import ATP-binding protein pstB OS=Methanococcoides burtonii (strain DSM 6242) GN=pstB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.322e-34
Identity = 87/191 (45.55%), Postives = 121/191 (63.35%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG--KKLTENEVYKXXXXXXXXXXXXXKTGAE---ISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKST LR LNR+ +        G V +DG +I   D+DV+ LR+ VGM+FQ P  F  ++ DNI YGP++ G  K  TE  V+K             + G +   +S GQ QR+ +ARTLA +PE+LL DEP SALDPIST  IED++++LKK +  TIV+V+H+++Q  RI+D     ++GEI+E
Sbjct:   42 GPSGCGKSTFLRCLNRMNDLVKSCSIEGEVLVDGENIYDKDVDVVDLRKNVGMVFQKPNPFPMSIYDNIAYGPKIHGCSKSETEERVHKALDDAALMGEVQDRLGDQAFSLSGGQQQRLCIARTLAVKPEILLFDEPCSALDPISTSKIEDLILELKKDY--TIVIVTHNMQQAARISDHTAFFLHGEIIE 230          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_THEMA (Phosphate import ATP-binding protein pstB OS=Thermotoga maritima GN=pstB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.909e-33
Identity = 83/192 (43.23%), Postives = 117/192 (60.94%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEP-----PSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTE------NEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GK+TLLR++NR+ +        G ++  G+DI D  LDV   R++VGM+FQ P  F  ++ DN+ +GP++ G K          E  K             K+G  +S GQ QR+ +AR LA EPEV+LLDEPTSALDPI+TQ IE +L +L + +  TIV+V+H+I Q  RIAD +  +  GE++E
Sbjct:   37 GPSGCGKTTLLRSINRMNDHLPGFRVEGKIYFKGQDIYDPQLDVTEYRKRVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHILDRIVEESLKKAALWDEVKSELNKSGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENY--TIVIVTHNIGQAIRIADYIAFMYRGELIE 226          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_CARHZ (Phosphate import ATP-binding protein pstB OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pstB PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.255e-33
Identity = 84/199 (42.21%), Postives = 124/199 (62.31%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG----KKLTE--NEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLL 577
            GPSG GKST LR LNR+ +        G++  DG DI   + DV+ LR++VGM+FQ P  F  +V +N+ Y P++ G    +KL E   +  +             K    +S GQ QR+ +AR LA EPEVLL+DEPTSALDPIST  IE+++ +LKKK+  TIV+V+H+++Q  RI+D     +NGE++E+ + +++
Sbjct:   39 GPSGCGKSTFLRTLNRMNDLIPGVRIEGSILFDGVDIYKENFDVVELRKRVGMVFQSPNPFPKSVYENVAYAPKIHGLKDKRKLDEIVEKSLRGAALWDEVKDRLHKPATGLSGGQQQRLCIARALAIEPEVLLMDEPTSALDPISTMRIEELIQELKKKY--TIVIVTHNMQQAARISDRTAFFLNGELIEMDRTEVI 235          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_METMP (Phosphate import ATP-binding protein pstB OS=Methanococcus maripaludis GN=pstB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.252e-33
Identity = 86/199 (43.22%), Postives = 126/199 (63.32%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPSGT-----VFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG----KKLTE--NEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLL 577
            GPSG GKST LR LNR+ +  SG      + LD ++I   D+DV+ LR++VGM+FQ P  F  ++ DNI YGP++ G    K+L E      K             K+  ++S GQ QR+ +ART+A +P+V+L+DEP SALDPIST  IED++V+LKK++  TIV+V+H+++Q  R++D     + G++VE  K D L
Sbjct:   37 GPSGCGKSTFLRCLNRMNDLISGVKITGEITLDEKNIYDKDVDVVELRKRVGMVFQKPNPFPMSIYDNIAYGPRIHGIKDKKQLDEIVEWALKKSALWDDVKEDLKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPCSALDPISTLKIEDLMVELKKEY--TIVIVTHNMQQASRVSDYTGFFMLGDLVEFNKTDKL 233          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_ARCFU (Phosphate import ATP-binding protein pstB OS=Archaeoglobus fulgidus GN=pstB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.252e-33
Identity = 84/192 (43.75%), Postives = 116/192 (60.42%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPSGT-----VFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTEN------EVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKSTLLR+LNRL E   G      V  DG++I D  +D + LRR++GM+FQ P  F  ++ DN+ YGP++ G K  E       E  K              +   +S GQ QR+ +AR +A  PEV+L DEPTSALDPI+   IE+++V+LKK +  T+V+V+H+I+Q  RI+D V     GE+VE
Sbjct:   37 GPSGCGKSTLLRSLNRLIELVDGVRIEGEVIFDGKNIYDDGVDAVELRRRIGMVFQHPNPFPKSIFDNVAYGPRVHGIKDKERLKEIVEESLKKAALWDEVKDRLSDSALGLSGGQQQRLCIARAIATNPEVILFDEPTSALDPIAAAKIEELMVELKKNY--TVVVVTHNIQQAARISDYVAFFWMGELVE 226          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_CLOAB (Phosphate import ATP-binding protein pstB OS=Clostridium acetobutylicum GN=pstB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.553e-33
Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPS-----GTVFLDGRDI-TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK-------LTENEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKST LR +NR+ +  S     G V  +G+D+  D D + LR++VGM+FQ P  F  ++ DN+ YGP++ G K       + E  + K             K+   +S GQ QR+ +ARTLA EPEVLL+DEPTSALDPIST  IE+++ +LK K+  T+++V+H+++Q  RI+D     +NGE+VE
Sbjct:   36 GPSGCGKSTFLRTINRMNDLISTVKIDGEVMFEGKDVYKDYDEIELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKNKGKLDEIVERSL-KGSALWEEVKDRLKKSALGLSGGQQQRLCIARTLAVEPEVLLMDEPTSALDPISTLKIEELMDELKHKY--TVIIVTHNMQQAGRISDNTAFFLNGEVVE 224          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_LACDA (Phosphate import ATP-binding protein pstB OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=pstB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.252e-33
Identity = 90/199 (45.23%), Postives = 124/199 (62.31%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPSG-----TVFLDGRDIT--DLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG----KKLTE--NEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLL 577
            GPSG GKSTLLR+LNR+ +   G     ++ LDG DI   DLDV  LR++VGM+FQ P  F  +V DN+ YGP++ G    K+L E      K             K+   +S GQ QR+ +AR LA +PEVLL+DEPTSALDPIST  IE++ ++LKK +  TIV+V+H+++Q  RI+D     + G++VE  + D L
Sbjct:   38 GPSGCGKSTLLRSLNRMNDLVEGCRIDGSIKLDGTDIYNGDLDVTVLRQRVGMVFQRPNPFPMSVYDNVAYGPRIHGITDKKELDEIVETSLKQAAIWDDLKDRLKKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTSKIEELALELKKNY--TIVIVTHNMQQAVRISDKTGFFLLGDLVEFGETDQL 234          
The following BLAST results are available for this feature:
BLAST of FC925090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB17I_ARATH4.953e-8275.12ABC transporter I family member 17 OS=Arabidopsis ... [more]
PSTB1_THETN1.234e-4047.80Phosphate import ATP-binding protein pstB 1 OS=The... [more]
PSTB2_THETN7.488e-3847.64Phosphate import ATP-binding protein pstB 2 OS=The... [more]
PSTB_METBU1.322e-3445.55Phosphate import ATP-binding protein pstB OS=Metha... [more]
PSTB_THEMA1.909e-3343.23Phosphate import ATP-binding protein pstB OS=Therm... [more]
PSTB_CARHZ3.255e-3342.21Phosphate import ATP-binding protein pstB OS=Carbo... [more]
PSTB_METMP4.252e-3343.22Phosphate import ATP-binding protein pstB OS=Metha... [more]
PSTB_ARCFU4.252e-3343.75Phosphate import ATP-binding protein pstB OS=Archa... [more]
PSTB_CLOAB5.553e-3343.23Phosphate import ATP-binding protein pstB OS=Clost... [more]
PSTB_LACDA7.252e-3345.23Phosphate import ATP-binding protein pstB OS=Lacto... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YB02FM1 TF Citrus clementina cDNA clone KN0AAP3YB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925090 ID=FC925090; Name=FC925090; organism=Citrus clementina; type=EST; length=786bp
GGTGATCATCGTTATCATTGGGCCCAGTGGAAGCGGCAAATCAACCCTGT
TGAGGGCGCTGAACCGTCTGTGGGAGCCACCCTCTGGTACGGTGTTCTTG
GACGGCCGCGATATTACTGATCTCGACGTTCTCTCTCTTCGTCGTAAAGT
TGGCATGCTCTTCCAGATTCCGGCTCTCTTCGAAGGCACAGTTGCTGATA
ATATTCGATATGGACCACAATTGAGGGGAAAGAAATTAACCGAGAATGAG
GTTTACAAGTTGCTCTCACTTGCAGACCTCGACTCCTCTTTCCTTAGCAA
AACGGGTGCCGAAATATCAGTTGGCCAAGCTCAAAGAGTTGCTCTAGCTC
GAACACTGGCCAACGAACCAGAGGTTCTGCTTCTGGATGAGCCAACGAGT
GCATTGGATCCAATATCGACACAGAACATAGAGGATGTGTTAGTGAAGCT
GAAGAAGAAACATGGAATGACAATTGTCATGGTCTCTCACAGCATCAAAC
AAATCCAAAGGATCGCCGACGTCGTTTGCCTGCTAGTGAATGGTGAGATT
GTGGAAGTTCTGAAACCTGATCTGCTCTCGGAAGCCAAGCATCCCATGGC
ACTAAGGTTTCTTCAACTCAGCGGTTAGGGAGACATGTCACTTGTTCAAT
TTTATTCCACCATGTCAACTGTGCTGTCCCATTTGTACTTGATTATGAAA
ATAAACTGAATTATGTATTACTATATGAGCAAGTATTGTACTACATATAC
TTCTTGTACTTCCTAAAAAAAAAAAAAAAAAAAAAA
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