FC925127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925127 vs. ExPASy Swiss-Prot
Match: BH093_ARATH (Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.267e-26 Identity = 97/261 (37.16%), Postives = 130/261 (49.81%), Query Frame = 1 Query: 31 MEL-TQHGFLEELLAPPIARRDAWS----SFSGGLN----EYLPSGWILDSL-------DESSTLAAAASNPSSFVGFSAAPSEASFECPPFTDHLHQGYHPFVDGFTVPEVDTSSYTKNEIPSFPSAQEEYPPMVVEEDHDQLCLRSSDHLHQNHSFEETKSSCAEIEQATSNITNQGFNMGLC--VDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKFAEEETE 759 MEL TQ EELL P + SF+GG + ++ P+G+ +D L DE++ L PSSF+ + P PP H P P + +S+ A +YP + ++ S + QN E + + + ++ F++G C K+K+KKLEGQPSKNLMAE LNDRLSMLRSIVPKISKMDRTSILGD IDY+KELL++INK +EE E Sbjct: 1 MELSTQMNVFEELLVPTKQETTDNNINNLSFNGGFDHHHHQFFPNGYNIDYLCFNNEEEDENTLLY-----PSSFMDLISQP-------PPLLLHQPPPLQPLS-----PPLSSSATA--------GATFDYPFLEALQEIIDSSSSSPPLILQNGQEENFNNPMSYPSPLMESDQSKSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQE 236
BLAST of FC925127 vs. ExPASy Swiss-Prot
Match: BH061_ARATH (Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.022e-24 Identity = 83/230 (36.09%), Postives = 114/230 (49.57%), Query Frame = 1 Query: 118 LNEYLPSGWILDSL--------------DESSTLAAAASNPSSFVGFSAAPSEASFECPPFTDHLHQGYHPFVDGFTVPEVDTSSYTKNEIPSFPSAQEEYPPMVVEEDHDQLCLRSSDHLHQNHS--FEETKSSCAEIEQATSNITNQGFNMGLCVDRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKFAEEETE 759 +++++P+ W D L SS+L S P + PS ++ PP + +PF++ ++ SSY+ PP++ L +S N+S EE+KS + E ++KR NKKLEGQPSKNLMAE LNDRLS+LRSIVPKI+KMDRTSILGD IDY+KELL++INK E+E E Sbjct: 26 IDQFVPNDWNFDYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQPPQPSSPLYDSPPLSSAFD---YPFLE-----DIIHSSYSP-------------PPLI---------LPASQENTNNYSPLMEESKSFISIGE----------------TNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQE 209
BLAST of FC925127 vs. ExPASy Swiss-Prot
Match: SCRM2_ARATH (Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.394e-17 Identity = 58/112 (51.79%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 424 SSDHLHQNHSFEETKSSCA-EIEQATSNITN-QGFNMGLCVDRKRKNK-KLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKFAEE 750 SS + S E KSS EI+ ++ I + G N NK K +G P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD IDYLKELL+RIN E Sbjct: 211 SSKMCNSESSSEMRKSSYEREIDDTSTGIIDISGLNYESDDHNTNNNKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTE 322
BLAST of FC925127 vs. ExPASy Swiss-Prot
Match: ICE1_ARATH (Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.027e-16 Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 562 KLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKFAEE 750 K +G P+KNLMAE LNDRL MLRS+VPKISKMDR SILGD IDYLKELL+RIN E Sbjct: 300 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 362
BLAST of FC925127 vs. ExPASy Swiss-Prot
Match: AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.812e-12 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 541 DRKRKNKKLEGQPSKNLMAEXXXXXXLNDRLSMLRSIVPKISKMDRTSILGDTIDYLKELLERINKFAEEETE 759 D K K K +G +KNLMAE LNDRL LRS+VP+I+K+DR SILGD I+Y+KEL + +E E Sbjct: 300 DPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372 The following BLAST results are available for this feature:
BLAST of FC925127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925127 ID=FC925127; Name=FC925127; organism=Citrus clementina; type=EST; length=759bpback to top |