FC925178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925178 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.957e-25 Identity = 69/191 (36.13%), Postives = 95/191 (49.74%), Query Frame = 2 Query: 149 DPETGVSSKDITISENPKISARVYLPKLA------------QPISTQKLPILFYTHGGGFCFESAFSLVETKLMNALVSEAKVVGISIEYRLAPEHPLPIAYEDSWSALQWVASHSVNNGGFDNKEPWLARFGDFDRVFVAGDSAGANIAHHVVMRAGREKLAGGVKILGAFLTQPYFWGSKPVGSEDTRD 685 +P GV S D+ I + +RVY P A +P+ +P++ + HGG F SA S + L LV K V +S+ YR APE+P P AY+D W AL WV S S D+K +F+AGDS+G NIAH+V +RAG G+ +LG L P F G++ SE + D Sbjct: 58 NPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKV----------HIFLAGDSSGGNIAHNVALRAGE----SGIDVLGNILLNPMFGGNERTESEKSLD 234
BLAST of FC925178 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.704e-23 Identity = 75/219 (34.25%), Postives = 104/219 (47.49%), Query Frame = 2 Query: 92 DGSVERLSGSPMVPPSP-DEDPETGVSSKDITISENPKISARVY-------------------LPKLAQPISTQKLPILFYTHGGGFCFESAFSLVETKLMNALVSEAKVVGISIEYRLAPEHPLPIAYEDSWSALQWVASHSVNNGGFDNKEPWLARFGDFD-RVFVAGDSAGANIAHHVVMRAGREKLAGGVKILGAFLTQPYFWGSKPVGSEDTRD 685 DG+ ER G + P + P GVSS D I ++ + R+Y L L + + P++ + HGG F SA S + L V +K V +S+ YR APEH P AY+D W+AL+WV S +P++ GD RVF++GDS+G NIAHHV +RA E GVK+ G L F G++ SE D Sbjct: 38 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-----------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE----GVKVCGNILLNAMFGGTERTESERRLD 241
BLAST of FC925178 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.837e-23 Identity = 70/191 (36.65%), Postives = 96/191 (50.26%), Query Frame = 2 Query: 152 PETGVSSKDITISENPKISARVYLP------------KLAQPISTQKL-PILFYTHGGGFCFESAFSLVETKLMNALVSEAKVVGISIEYRLAPEHPLPIAYEDSWSALQWVASHSVNNGGFDNKEPWLARFGDFDRVFVAGDSAGANIAHHVVMRAGREKLAGGVKILGAFLTQPYFWGSKPVGSEDTRD 685 P GV S D + + R+Y P +L +P+ST ++ P+L + HGG F SA S + LV+ VV +S++YR +PEH P AY+D W+AL WV S G D+ V++AGDS+G NIAH+V +RA E GVK+LG L P F G + SE T D Sbjct: 59 PLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNV----------YVYLAGDSSGGNIAHNVAVRATNE----GVKVLGNILLHPMFGGQERTQSEKTLD 234
BLAST of FC925178 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.095e-22 Identity = 64/189 (33.86%), Postives = 92/189 (48.68%), Query Frame = 2 Query: 149 DPETGVSSKDITISENPKISARVYLPK----------LAQPISTQKLPILFYTHGGGFCFESAFSLVETKLMNALVSEAKVVGISIEYRLAPEHPLPIAYEDSWSALQWVASHSVNNGGFDNKEPWLARFGDFDRVFVAGDSAGANIAHHVVMRAGREKLAGGVKILGAFLTQPYFWGSKPVGSEDTRD 685 +P GV S D+ I + +RVY P L P+ + +P++ + HGG F SA S + L LV V +S+ YR APE+ P AY+D W+ L+WV S S D+K R+F+AGDS+G NI H+V +RA + + +LG L P F G++ SE D Sbjct: 58 NPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSSWLRSKKDSKV----------RIFLAGDSSGGNIVHNVAVRAVESR----IDVLGNILLNPMFGGTERTESEKRLD 232
BLAST of FC925178 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.194e-13 Identity = 56/164 (34.15%), Postives = 79/164 (48.17%), Query Frame = 2 Query: 98 SVERLSGSPMVPPSPDEDPETGVSSKDITISENP--KISARVYLPKLAQPISTQKLPILFYTHGGGFCFESAFSLVETKLMNALVSEAKVVGISIEYRLAPEHPLPIAYEDSWSALQWVASHSVNNGGFDNKEPWLARFG-DFDRVFVAGDSAGANIAHHVVMR 580 +V+ L+ VPP+ DE+ +T++E + RVY+PK + L FY HGGG+C SA L VV +S YRLAPE+ PI +ED + AL+W V L ++G D +RV V+GDSAG N+A V + Sbjct: 60 TVKFLTSFQEVPPTSDEN---------VTVTETTFNNVPVRVYVPKRKSKTLRRGL---FYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLRQDV-----------LEKYGVDPERVGVSGDSAGGNLAAAVAQQ 200
BLAST of FC925178 vs. ExPASy Swiss-Prot
Match: AAAD_HUMAN (Arylacetamide deacetylase OS=Homo sapiens GN=AADAC PE=1 SV=4) HSP 1 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 143 DEDPETGVSSKDITISENPKISARVYLPKLAQPISTQKLPILFYTHGGGFCFESAFSLVETKLMNALVSEAKVVGISIEYRLAPEHPLPIAYEDSWSALQWVASHSVNNGGFDNKEPWLARFG-DFDRVFVAGDSAGANIAHHVVMR 580 DE P T + +T ++ I RVY+PK + L FY HGGG+C SA L V +S YRLAP++ PI +ED ++AL+W V LA++G + +R+ ++GDSAG N+A V + Sbjct: 69 DEVPPTSDENVTVTETKFNNILVRVYVPKRKSEALRRGL---FYIHGGGWCVGSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRWFLRKKV-----------LAKYGVNPERIGISGDSAGGNLAAAVTQQ 201
BLAST of FC925178 vs. ExPASy Swiss-Prot
Match: AAAD_MOUSE (Arylacetamide deacetylase OS=Mus musculus GN=Aadac PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11 Identity = 50/164 (30.49%), Postives = 74/164 (45.12%), Query Frame = 2 Query: 98 SVERLSGSPMVPPSPDEDPETGVSSKDITISENP--KISARVYLPKLAQPISTQKLPILFYTHGGGFCFESAFSLVETKLMNALVSEAKVVGISIEYRLAPEHPLPIAYEDSWSALQWVASHSVNNGGFDNKEPWLARFG-DFDRVFVAGDSAGANIAHHVVMR 580 +++ L VPP+ DE +T+ E + R+Y+PK + L FY HGGG+C SA L + V +S +Y LAP+H P +ED + +L+W V L ++G D RV V+GDSAG N+A V + Sbjct: 60 TIQLLMSFQEVPPTSDEH---------VTVMETAFDSVPVRIYIPKRKSMALRRGL---FYIHGGGWCLGSAAHFSYDTLSRWTAHKLDAVVVSTDYGLAPKHHFPRQFEDVYRSLRWFLQEDV-----------LEKYGVDPRRVGVSGDSAGGNLAAAVTQQ 200 The following BLAST results are available for this feature:
BLAST of FC925178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925178 ID=FC925178; Name=FC925178; organism=Citrus clementina; type=EST; length=748bpback to top |