FC925188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GRXC4_ARATH (Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 3.896e-44 Identity = 86/123 (69.92%), Postives = 107/123 (86.99%), Query Frame = 3 Query: 93 ISVLTLTIATLLFWASFSGASAKSSEAAFVEKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLLGIA 461 IS++ L +A + F + S A A S EA FV+KT+SSHKIVIFSKSYCPYC++AKSVF +L+ P+VVELDER+DGW+IQ ALGE+VGRRTVPQVFINGKH+GGSDDTV+AYESG+LA+LLG++ Sbjct: 7 ISMVMLLVALVTFISMVSSA-ASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLGVS 128
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GRXC8_ORYSJ (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 8.406e-39 Identity = 75/107 (70.09%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 144 SGASAKSSEAAFVEKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMA--PHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLLGI 458 S AS +S+++FV+ TV +H +VIFSKSYCPYCRRAK+VF +L + P+VVELD+R+DGW IQDAL +MVGRRTVPQVF++GKH+GGSDDTVEAYESGKLA+LL I Sbjct: 24 SAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLLNI 130
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GRXC3_ARATH (Glutaredoxin-C3 OS=Arabidopsis thaliana GN=GRXC3 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.075e-29 Identity = 64/103 (62.14%), Postives = 79/103 (76.70%), Query Frame = 3 Query: 144 SGASAKSSEAAFVEKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLL 452 + A A +S +AFV+ + S+KIVIFSKSYCPYC R+K +F++L P VVELD+R+DG IQ L E VGRRTVPQVF+NGKHIGGSDD A ESG+L +LL Sbjct: 25 NSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLL 127
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GRXS6_ORYSJ (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica GN=GRXS6 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.914e-28 Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 3 Query: 96 SVLTLTIATLLFWASFSGASAKSSEAAFVEKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLLG 455 + + + + LL A A+A S +AFV+ + S++I IFSK+YCPY RAK +F L P++VELD R+DG IQ L ++VGR TVPQVF+NG+H+GGSDDT A+ +G+L +LLG Sbjct: 6 AAVPIAVFLLLVLAEADPAAATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLG 125
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GRXC6_ORYSJ (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 4.634e-21 Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 174 AFVEKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLL 452 A ++TV+S +V++SKSYCP+C R K +F +L +ELD DG +Q AL E G+RTVP VFINGKHIGG DDT+ GKL LL Sbjct: 4 AKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GLRX_VERFO (Glutaredoxin OS=Vernicia fordii PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.300e-20 Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 183 EKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLL 452 ++ VSS+ +V+FSK++CPYC K + N+L V+ELD DG ++Q+AL E G+RTVP VFI GKHIGG D T ++ GKL LL Sbjct: 7 QELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAEWTGQRTVPNVFIGGKHIGGCDKTTGMHQEGKLIPLL 96
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GLRX_DICDI (Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.004e-20 Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 180 VEKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLL 452 V+ + +HK++IFSK+ CPYC K +F KL + P VVELD DG +Q A G++ G RTVPQVFIN K IGG D T + + GKL LL Sbjct: 4 VKALIKAHKLIIFSKTTCPYCISVKDLFKKLKVVPFVVELDLESDGSELQSAAGQISGVRTVPQVFINEKFIGGCDATTKLHSQGKLIPLL 94
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GLRX_RICCO (Glutaredoxin OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 3 Query: 183 EKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLL 452 ++ VSS+ +V+FSK+YCPYC K + ++L VVELD DG IQ AL E G+RTVP VFI GKHIGG D T + G+L LL Sbjct: 7 KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLL 96
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: GRXC1_ARATH (Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.665e-19 Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 141 FSGASAKSSEAAFV----EKTVSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLL 452 FSG E V ++ VS++ +V+FSK+YC YC+R K + +L V+ELDE DG IQ AL E G+ TVP VFI G HIGG D +E + GKL LL Sbjct: 5 FSGNRMSKEEMEVVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLL 112
BLAST of FC925188 vs. ExPASy Swiss-Prot
Match: TRXR3_HUMAN (Thioredoxin reductase 3 OS=Homo sapiens GN=TXNRD3 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 9.663e-19 Identity = 40/87 (45.98%), Postives = 61/87 (70.11%), Query Frame = 3 Query: 192 VSSHKIVIFSKSYCPYCRRAKSVFNKLNMAPHVVELDERDDGWNIQDALGEMVGRRTVPQVFINGKHIGGSDDTVEAYESGKLAQLL 452 + ++VIFSKSYCP+ R K +F+ L + +V+ELD+ DDG +Q+ L E+ ++TVP +F+N H+GG D T +AY+SG L +LL Sbjct: 174 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLL 260 The following BLAST results are available for this feature:
BLAST of FC925188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925188 ID=FC925188; Name=FC925188; organism=Citrus clementina; type=EST; length=576bpback to top |