FC925206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.817e-49 Identity = 90/116 (77.59%), Postives = 104/116 (89.66%), Query Frame = 3 Query: 3 EKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVFA 350 +KL LV+KSK P IT+MAVNK NW +N ++DVNAVTWGVFPAKE+IQPT+VDPASFKVWKDEAFEIWSRSWA+LYPE D SRKLLEEV++SYYLVSLVDN+YINGD+F+VFA Sbjct: 477 DKLDTLVEKSKAFPSITYMAVNKSENWVSNTGESDVNAVTWGVFPAKEVIQPTIVDPASFKVWKDEAFEIWSRSWANLYPEDDPSRKLLEEVKNSYYLVSLVDNNYINGDIFSVFA 592
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.538e-48 Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 3 Query: 3 EKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVFADL 356 EKL A+V+K K LP IT+MAVNK W +N Q DVNAVTWGVFPAKEIIQPT+VDPASF VWKDEAFE WSRSWA+LYPE D SR LLEEV++SYYLVSLV+NDYINGD+F VFADL Sbjct: 477 EKLDAVVEKCKALPSITYMAVNKGEQWVSNTAQADVNAVTWGVFPAKEIIQPTIVDPASFNVWKDEAFETWSRSWANLYPEADPSRNLLEEVKNSYYLVSLVENDYINGDIFAVFADL 594
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 9.654e-43 Identity = 79/118 (66.95%), Postives = 97/118 (82.20%), Query Frame = 3 Query: 3 EKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVFADL 356 EKL L++KSK P +T++AVNK+G +N+ VNAVTWGVFP KEI+QPTVVD ASF VWKDEAFEIWS+ WA L+PEGDSSR++L++VQ SY+LVSLVDNDYINGDLF F ++ Sbjct: 477 EKLDQLIEKSKAFPSLTYIAVNKDGESFSNIPTNAVNAVTWGVFPGKEIVQPTVVDSASFMVWKDEAFEIWSKGWACLFPEGDSSREILDKVQKSYFLVSLVDNDYINGDLFAAFKEI 594
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.378e-41 Identity = 77/115 (66.96%), Postives = 93/115 (80.87%), Query Frame = 3 Query: 3 EKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVF 347 EKL L++K K P +T++AVNK+G +N++ VNAVTWGVFP KEIIQPTVVD ASF VWKDEAFEIW+R W ++PEGDSSR+LLE+VQ +YYLVSLVDNDY+ GDLF F Sbjct: 477 EKLDQLIEKIKAFPSLTYIAVNKDGETFSNISPNAVNAVTWGVFPGKEIIQPTVVDHASFMVWKDEAFEIWTRGWGCMFPEGDSSRELLEKVQKTYYLVSLVDNDYVQGDLFAAF 591
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.217e-22 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 48 ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 320 + + VN +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDND+ Sbjct: 536 VNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDF 626
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.217e-22 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 48 ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 320 + + VN +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDND+ Sbjct: 536 VNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDF 626
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 48 ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 320 + + V+ +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDN++ Sbjct: 535 VNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEF 625
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 48 ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 320 + + V+ +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDN++ Sbjct: 535 VNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEF 625
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 8.793e-20 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 48 ITFMAVNKEGNW-KANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 320 + + A+NK+ + K N +T AVTWGVFP EI QPTVVDP SF+ W+DEA+++W W YP+ S +++ V + LV+LVDND+ Sbjct: 553 VNYHAINKDSTFDKTNSEETTPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQWGDFYPKESKSYGVIKAVHDEFRLVTLVDNDF 644
BLAST of FC925206 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.341e-19 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 9 LTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYING-DLFTVF 347 L L + K L +++ NK G+ N NAVTWGVFP +EIIQPT+V+ SF WKDEA+ + WA+ Y SRKLL + ++L +VDND+ NG LF VF Sbjct: 472 LNELKETVKKLNSVSYFVTNKNGDLDTNSQYEIPNAVTWGVFPNREIIQPTIVESTSFLAWKDEAYSL-GMEWANAYSPDSISRKLLVSMMKEWFLCVIVDNDFQNGQSLFDVF 584 The following BLAST results are available for this feature:
BLAST of FC925206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925206 ID=FC925206; Name=FC925206; organism=Citrus clementina; type=EST; length=660bpback to top |