FC925272

Overview
NameFC925272
Unique NameFC925272
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:349..1071. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.859e-68
Identity = 128/229 (55.90%), Postives = 165/229 (72.05%), Query Frame = 2
Query:   41 ERDQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            E +++   A +L   +VLPM +++  EL + E++ K GPGA +  S++AAQL T+N DAP+MLDRILRLLASYSV+ C+L      G  RLYSL  V K+   N+DGV +  LL MNQDKVL+ESW  LKDA+LEGGIPFN+A+G+  FEY G DPRFNK FN  M N+++++M  ILE Y+GF  +K +VDVGG  G TL  I +KYP IKGINFD PHVI+ APS+P
Sbjct:   15 EEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYP 243          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.341e-67
Identity = 122/232 (52.59%), Postives = 166/232 (71.55%), Query Frame = 2
Query:   32 VDGERDQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            ++ + +++F +A QL   +VLPM +++  EL + E++ K G GA +  +++AAQLLT N +A +MLDRILRLL SY+++EC L      G +RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE+Y GFD +K +VDVGG  G TL  I +KYP IKGINFD PHV++ APS+P
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYP 241          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.751e-67
Identity = 130/227 (57.27%), Postives = 158/227 (69.60%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            D+   +A QL+  +VLPM ++   EL + EI+ K GPGA L  SDIA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DPRFNK FN  M +++ + M  ILESYKGF+ +  LVDVGG  G  +  I +KYP IKGINFD PHVI  AP+ P
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFP 242          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.653e-67
Identity = 127/227 (55.95%), Postives = 160/227 (70.48%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +++  +A QL   +VLPM ++   EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ +  LVDVGG  G  +  I +KYP IKGINFD PHVI+ APS+P
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYP 243          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.482e-66
Identity = 126/227 (55.51%), Postives = 160/227 (70.48%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +++  +A QL   +VLPM ++   EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  LKDAIL+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ +  LVDVGG  G  +  I +KYP IKGINFD PHVI+ APS+P
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYP 243          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.936e-66
Identity = 125/227 (55.07%), Postives = 163/227 (71.81%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            D++  +A QL   +VLPMA+++  EL + EI+ K   G+ +  ++IA++L TKN +AP+MLDRILRLL SYSV+ CS   L   G  R+Y L  V KY   N+DGV +  L  MNQDKVL+ESW  LKDAIL+GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE+YKGF+ +  LVDVGG +G TL+ I +KYP +KGINFD PHVI+ APSHP
Sbjct:   17 DEAALFAMQLASASVLPMALKSALELDLLEIMAK--NGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHP 241          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.936e-66
Identity = 122/226 (53.98%), Postives = 162/226 (71.68%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSH 715
            +++  +A  L   +VLPM +++  EL + E++ K GPGA +  S++AAQL T N +AP+MLDRILRLLA+YSV++C L+     G  RLY L  V K+   N DGV + PLL MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE Y+GF+ +K +VDVGG  G TL  I +KYP IKGINF+ PHV++ APSH
Sbjct:    4 EEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSH 229          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.528e-66
Identity = 122/232 (52.59%), Postives = 162/232 (69.83%), Query Frame = 2
Query:   32 VDGERDQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            ++ + +++F +A QL   +VLPM +++  EL + E++ K G GA +   D+AAQL T N DA +MLDRILRLL SY+++EC L      G  RLY L  V K+   N+DGV + PL  MNQDKVL+ESW  L DA+++GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE+Y GFD +K +VDVGG  G TL  I +KYP IKGINFD PHVI+ APS+P
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYP 241          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.528e-66
Identity = 124/227 (54.63%), Postives = 160/227 (70.48%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            D++F +A QL   +VLPM ++A  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+ RLLA+YSV+ C+L         RLYSL  V K+   N DGV + P+L MNQDKVL+ESW  L DA+L+GG+PFN+A+G+  FEY G DPRFNK FN  M ++T+L M  ILE Y GF+ +  +VDVGG  G T+  I +KYP IKGINFD PHVI  APS+P
Sbjct:   13 DEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYP 239          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 5.632e-66
Identity = 122/227 (53.74%), Postives = 161/227 (70.93%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            D++F +A QL   +VLPM +++  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+LRLLA+YSV+ C+L         RLYSL  V K    N DGV + PLL MNQDKVL+ESW  L DA+L+GG+PFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE YKGF+ +  +VDVGG  G T+  I +KYP IKGINFD  HVI+ AP++P
Sbjct:   13 DEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYP 239          
The following BLAST results are available for this feature:
BLAST of FC925272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_CATRO7.859e-6855.90Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT2_OCIBA1.341e-6752.59Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT3_POPKI1.751e-6757.27Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_POPKI6.653e-6755.95Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM1.482e-6655.51Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
OMT1_ARATH1.936e-6655.07Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_COFCA1.936e-6653.98Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_OCIBA2.528e-6652.59Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CAPCH2.528e-6654.63Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN5.632e-6653.74Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YG16FM1 TF Citrus clementina cDNA clone KN0AAP8YG16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925272 ID=FC925272; Name=FC925272; organism=Citrus clementina; type=EST; length=723bp
GAAATTCAAGAACTTTAAAATGGATTCTATAGTTGATGGAGAAAGAGACC
AAAGCTTTGCATATGCTAGTCAATTGGTGATGGGTACAGTGCTACCCATG
GCCATTCAAGCGGTGTATGAGCTGGGCATTTTCGAGATCCTAGACAAAGT
TGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAGCCCAATTGCTTA
CCAAGAACAAAGACGCACCCATGATGCTGGATCGGATTCTCAGGCTTCTG
GCTAGCTACAGTGTTGTTGAATGCTCACTTGATGCTTCTGGTGCTCGGAG
ACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGCCTAACAAAGATG
GCGTCTTACTAGGCCCCCTATTACAAATGAATCAGGACAAGGTCCTTCTG
GAAAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGGAGGAATTCCATT
TAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAGGATTGGACCCTA
GGTTCAATAAACATTTTAACACAGCAATGTATAACTATACCTCCCTGGTT
ATGAGCAACATTCTTGAATCTTACAAGGGCTTCGACAACATCAAGCAACT
GGTCGATGTTGGTGGCAGTCTCGGTGTTACTCTTCAAGCCATCACTACCA
AGTACCCCTATATTAAGGGCATCAATTTCGACCAGCCTCATGTTATTGAC
CATGCCCCATCACATCCCACGTA
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