FC925275

Overview
NameFC925275
Unique NameFC925275
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1972 contig Ccv1_Contig1972:1..640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.222e-89
Identity = 154/203 (75.86%), Postives = 171/203 (84.24%), Query Frame = 3
Query:   60 DSNDNELEQLQDGGE----------GFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            D+ D  +E+ Q  G+          GF  P TNSFG+TFRDY  ESER++GVEEFYR  HI QT DFV++MREEY KLNR EMSIWECCELLNEF+DESDPDLDEPQIEHLLQTAEAIRKDYP+EDWLHLTGLIHDLGKVLLH  FGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDY+NP++N+K G Y+EG GL+NVL
Sbjct:   13 DAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIYTEGCGLDNVL 215          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 5.663e-85
Identity = 151/212 (71.23%), Postives = 167/212 (78.77%), Query Frame = 3
Query:   36 WHRMAVLADSNDNELEQLQDGG-----------EGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            +  ++    S DN  E   DGG           E F  PE N+FG+ FRDY VESERQKGVEEFYR QHINQT DFVK+MR EYGKL+++ MSIWECCELLNE VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKV+  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD++N  +NTKNG YSEG GLNNV+
Sbjct:   10 FEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDYDVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFVENPDFHNETYNTKNGIYSEGCGLNNVM 221          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.058e-83
Identity = 144/190 (75.79%), Postives = 162/190 (85.26%), Query Frame = 3
Query:   69 DNELEQLQDGGEGFTVPETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            DN  E + DGG  F VP++N+FG  FR+Y  ESER++ VEEFYR  HINQT DFV+RMREEYG++++ EM IWEC ELLNEF+D+SDPDLD PQIEHLLQTAEAIRKD+P+EDWLHLTGLIHDLGKVLLHP FGELPQW+VVGDTFPVGCAFDE  VH KYFKENPDY NP  NTK GAYSEG GL+NVL
Sbjct:   25 DNAAELVLDGG--FVVPDSNAFGNAFRNYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGDTFPVGCAFDECNVHFKYFKENPDYLNPKLNTKFGAYSEGCGLDNVL 212          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 9.356e-80
Identity = 143/203 (70.44%), Postives = 163/203 (80.30%), Query Frame = 3
Query:   60 DSNDNELEQLQDGG---------EGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            +  DNEL  + DGG         + F  P+ N  G +FRDY   ESERQ+GVEEFYR QHI+QT DFVK+MR+EYGKLN++EMSIWECCELLN  VDESDPDLDEPQI+HLLQTAEAIR+DYP+EDWLHLT LIHDLGKVLL P+FG LPQWAVVGDTFPVGC FD + +HHKYFK N D NNP +NTKNG Y+EG GL+NVL
Sbjct:   21 EERDNEL--VLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPVGCTFDSANIHHKYFKGNHDINNPKYNTKNGVYTEGCGLDNVL 221          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.034e-78
Identity = 138/192 (71.88%), Postives = 154/192 (80.21%), Query Frame = 3
Query:   66 NDNELEQLQDGGEGFTVPETNSFGQTFRDY-GVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            +D  + ++    E F  PE N+FG+ FRDY    SERQK VE FY TQH NQT DFV++MR EYGKL+++ M+IWECCEL  E VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKVL  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD+NNP +NTK G YSEG GL NVL
Sbjct:   27 SDIPMSKISSDDEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFMENPDFNNPKYNTKAGIYSEGCGLENVL 218          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.508e-45
Identity = 89/169 (52.66%), Postives = 114/169 (67.46%), Query Frame = 3
Query:  138 QTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNR-VEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNE--DWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKNGAYSEGRGLNNV 635
            + FR+Y    +R   V E YR  H  QT D+    +++Y +L+  ++M +WE  ELLN  +DESDPD + PQI H LQTAEAIRK YP+   DW HLTG IHDLGKVLL   F E PQWA VGDTFP+GC FDES + +++FK NPDYN+  +N++ G Y +  GL NV
Sbjct:   30 EEFRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTSIKMGLWEAAELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLGKVLLSKKFKEQPQWATVGDTFPLGCKFDESNIFYEFFKMNPDYNDSKYNSECGIYKKNIGLENV 195          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_MOUSE (Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.291e-36
Identity = 81/175 (46.29%), Postives = 107/175 (61.14%), Query Frame = 3
Query:  117 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            PE      +FR+Y         V   Y+  H +QT DFV R R +YG  +  +M+I E   +L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK++    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL NVL
Sbjct:   19 PEMAKSKDSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVL 189          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_RAT (Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.414e-35
Identity = 80/175 (45.71%), Postives = 108/175 (61.71%), Query Frame = 3
Query:  117 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            PE      +FR+Y         V   Y+  H +QT DFV R R ++G  +  +M++ E  ++L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK+L    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL NVL
Sbjct:   19 PEMAKSKGSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVL 189          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_HUMAN (Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.197e-34
Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 3
Query:  117 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            PE      +FR+Y         V   Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+ VL
Sbjct:   19 PEVAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVL 189          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_PONAB (Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.564e-34
Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 3
Query:  117 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            PE      +FR+Y         V   Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+ VL
Sbjct:   19 PEMAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVL 189          
The following BLAST results are available for this feature:
BLAST of FC925275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX1_ARATH2.222e-8975.86Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX4_ARATH5.663e-8571.23Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ4.058e-8375.79Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX2_ARATH9.356e-8070.44Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX5_ARATH1.034e-7871.88Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI1.508e-4552.66Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_MOUSE8.291e-3646.29Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV... [more]
MIOX_RAT1.414e-3545.71Inositol oxygenase OS=Rattus norvegicus GN=Miox PE... [more]
MIOX_HUMAN1.197e-3445.71Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV... [more]
MIOX_PONAB1.564e-3445.71Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YF06FM1 TF Citrus clementina cDNA clone KN0AAP3YF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925275 ID=FC925275; Name=FC925275; organism=Citrus clementina; type=EST; length=640bp
CAAGAAGGAGAATTTTAATCACCAGGCTCTGCAATTGGCACAGGATGGCT
GTTCTCGCTGATTCAAATGACAACGAATTGGAGCAGCTGCAGGATGGAGG
AGAAGGATTCACGGTGCCTGAGACTAATTCGTTTGGTCAAACTTTCAGGG
ATTATGGTGTTGAAAGTGAGCGGCAAAAGGGCGTGGAGGAATTCTATAGA
ACTCAACATATTAATCAGACCTGTGACTTTGTGAAAAGGATGAGAGAAGA
GTATGGAAAACTGAATAGGGTGGAAATGAGTATATGGGAATGCTGTGAGC
TACTAAATGAATTTGTTGATGAGAGTGATCCCGACCTTGATGAGCCTCAA
ATTGAGCACTTGCTGCAGACAGCCGAGGCCATTAGGAAGGACTATCCTAA
TGAGGATTGGCTACATTTGACCGGTCTCATCCATGATCTTGGAAAGGTTC
TTCTTCATCCTGATTTTGGGGAACTTCCTCAGTGGGCTGTTGTTGGTGAC
ACATTCCCCGTTGGTTGTGCCTTTGATGAATCAATTGTTCACCACAAGTA
TTTTAAGGAGAATCCAGACTACAACAATCCTGCTTTTAACACCAAAAATG
GAGCTTATTCAGAAGGCCGTGGATTAAACAATGTGTTGAT
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