FC925293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L1_MOUSE (Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.023e-33 Identity = 83/218 (38.07%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L L + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP++ KR+EI+N + E E EED+ +EE KG+P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G Sbjct: 48 ILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKG 265
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L1_PONAB (Nucleosome assembly protein 1-like 1 OS=Pongo abelii GN=NAP1L1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33 Identity = 83/218 (38.07%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L L + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP++ KR+EI+N + E E EED+ +EE KG+P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G Sbjct: 48 ILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSGAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKG 265
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L1_HUMAN (Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33 Identity = 83/218 (38.07%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L L + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP++ KR+EI+N + E E EED+ +EE KG+P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G Sbjct: 48 ILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKG 265
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L1_BOVIN (Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33 Identity = 83/218 (38.07%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L L + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP++ KR+EI+N + E E EED+ +EE KG+P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G Sbjct: 48 ILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKVEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKG 265
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: YGNB_SCHPO (Putative nucleosome assembly protein C2D10.11C OS=Schizosaccharomyces pombe GN=SPBC2D10.11c PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.795e-33 Identity = 75/208 (36.06%), Postives = 123/208 (59.13%), Query Frame = 1 Query: 118 DEGARADLVGVLKN----------KLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQE--EDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID-DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDEDEP----ILEKAIGTEIEW 690 D+ A ++ G+L+N +L +L G+ S +E L PAV+ R+ L+ +Q + D ++ +F ++ LE KY+K YQP++++R EI+ GV E +E+ ++E ++ + KG+P+FWLT + N ++ E IT DE L+ L DI++ + D G+KLEF FD N YF N +LTKTY+ D+ P + + A G +I W Sbjct: 48 DKSAHDEVSGLLRNNPAMLSMIEGRLSSLVGKSSGYIESLAPAVQNRITALKGLQKDCDAIQYEFRQKMLDLETKYEKKYQPIFSRRAEIIKGVSEPVDDELDHEEEIFQNNLPDPKGIPEFWLTCLHNVFLVGEMITPEDENVLRSLSDIRFTNLSGDVHGYKLEFEFDSNDYFTNKILTKTYYYKDDLSPSGEFLYDHAEGDKINW 255
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L1_XENTR (Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis GN=nap1l1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.559e-32 Identity = 84/218 (38.53%), Postives = 116/218 (53.21%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEV--AMDQEED---------KATEE---------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L +L G + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP++ KR +I+N E E +D+EED K EE KG+P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN +F N VLTKTY M E D P + G I+W G Sbjct: 49 VLAALQERLDDLVGTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPLFDKRSDIINATYEPTEEECEWKVDEEEDISGDLKDKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSEAGQPMSFTLEFHFEPNDFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKG 266
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NPL1A_XENLA (Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis GN=nap1l1-A PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.365e-32 Identity = 84/217 (38.71%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVE----------------GAPNEVAMDQEEDKATEE---KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L +L G + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP++ KR +I+N E G E A +EE K E+ KG+P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEFYF+PN +F N VLTKTY M E D P + G I+W G Sbjct: 49 VLAALQERLDDLVGTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPLFDKRSDIINATYEPTEEECEWKVEEEDISGDLKEKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMLQEHDEPILKHLKDIKVKFSDAGQPMSFTLEFYFEPNEFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKG 265
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L1_RAT (Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus GN=Nap1l1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.365e-32 Identity = 83/218 (38.07%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L L + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP++ KR+EI+N + E E EED+ +EE KG+P+FWLT K ND+LS+ + E DE LK LKDI K+ P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G Sbjct: 48 ILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFK-NDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFILEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKG 264
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NPL1B_XENLA (Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis GN=nap1l1-B PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.659e-31 Identity = 83/218 (38.07%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEV--AMDQEED---------KATEE---------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG 699 ++ L+ +L +L G + +E L V++RV L+ +Q + ++EAKF+EE LE KY LYQP + KR +I+N E E +D+EED K EE KG+P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN +F N +LTKTY M E D P + G I+W G Sbjct: 49 VLAALQERLDDLVGTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPFFEKRSDIINASYEPTEEECEWKVDEEEDIAEDLKEKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSEAGQPMNFMLEFHFEPNEFFTNELLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKG 266
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L4_RAT (Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus GN=Nap1l4 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.128e-30 Identity = 82/221 (37.10%), Postives = 115/221 (52.04%), Query Frame = 1 Query: 139 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVE--------------------GAPNEVAMDQEEDKATEE---KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDEDE---------PILEKAIGTEIEWYPG 699 ++ L+ +L N++ S +E L AV++R+ L+++Q +EAKF+EE LE KY LYQP++ KR E + G VE N+V + ++E A EE KG+P+FW T +N D+LSE + E DE LK L+DIK D P F LEF+F+PN YF N VLTKTY M E + P + G I+W G Sbjct: 37 VLAALQERLDNVSHTPSSYIETLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPTDAESAWHSENEEDDKLAGDMKNKVVIAEKEAAAVEELNPKGIPEFWFTIFRNVDMLSELVQEYDEPILKHLQDIKVKFSDPGQPMSFVLEFHFEPNDYFTNPVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTIDWKKG 257 The following BLAST results are available for this feature:
BLAST of FC925293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925293 ID=FC925293; Name=FC925293; organism=Citrus clementina; type=EST; length=748bpback to top |