FC925326

Overview
NameFC925326
Unique NameFC925326
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925326 vs. ExPASy Swiss-Prot
Match: CASD1_HUMAN (CAS1 domain-containing protein 1 OS=Homo sapiens GN=CASD1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 60/201 (29.85%), Postives = 96/201 (47.76%), Query Frame = 2
Query:  152 LHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWM-------EKLEETEVKLRILIKSAIGLLALMVGFLWFEYIYKLDKITYNKYHPYTSWIPITVYICLRNISQNVRSYSLTLFAWLGKITLETYISQFHIWLRSSVPDAQPKXXXXXXXXXXXXNFMLTTAIYITVSYRLFELTNTLKIAFVPGKDDKRLLHNLISAAIIF 733
            ++EW FR  LDRY+   GM++A+ +  ++K         E L   ++   +L  S +  L   +   W       +K   N+ HP  S + I  +I +RNI    RS   + FAW GKI+LE +I Q+HIWL      A  +            N +++T I++ V++ + ++TN L    +P KD+  LL  L   A  F
Sbjct:  593 VYEWWFRWRLDRYVVFHGMLFAFIYLALQKRQILSEGKGEPLFSNKISNFLLFISVVSFLTYSI---WASSCK--NKAECNELHPSVSVVQILAFILIRNIPGYARSVYSSFFAWFGKISLELFICQYHIWLA-----ADTRGILVLIPGNPMLNIIVSTFIFVCVAHEISQITNDLAQIIIP-KDNSSLLKRLACIAAFF 782          
BLAST of FC925326 vs. ExPASy Swiss-Prot
Match: CASD1_DANRE (CAS1 domain-containing protein 1 OS=Danio rerio GN=casd1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.908e-17
Identity = 59/199 (29.65%), Postives = 97/199 (48.74%), Query Frame = 2
Query:  152 LHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWM-------EKLEETEVKLRILIKSAIGLLALMVGFLWFEYIYKLDKITYNKYHPYTSWIPITVYICLRNISQNVRSYSLTLFAWLGKITLETYISQFHIWLRSSVPDAQPKXXXXXXXXXXXXNFMLTTAIYITVSYRLFELTNTLKIAFVPGKDDKRLLHNLISAAI 727
            +HEW FR  LDR+  + GM++A+ +  ++K+        E L   ++   +L  S +  +   +   W       +K   N+ HPY S   I  +I +RNI    RS   + FAW GKI+LE +I Q+HIWL      A  K            N +++T I++ V++ + ++TN L    +P K+   LL  L+ A +
Sbjct:  584 IHEWWFRWKLDRFAVVNGMLFAFIYLLLQKYQLLSEGKGEPLFSNKISNCLLFVSVVSFMTYSI---WASGCK--NKSECNEMHPYIS--VILAFILIRNIPGYARSLYSSFFAWFGKISLELFICQYHIWLA-----ADTKGILVLIPGNPTLNIIVSTFIFVCVAHEISQITNDLAQVAIP-KESGPLLKRLLGAGV 769          
BLAST of FC925326 vs. ExPASy Swiss-Prot
Match: CASD1_MOUSE (CAS1 domain-containing protein 1 OS=Mus musculus GN=Casd1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.533e-16
Identity = 56/202 (27.72%), Postives = 94/202 (46.53%), Query Frame = 2
Query:  152 LHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWM-------EKLEETEVKLRILIKSAIGLLALMVGFLWFEYIYKLDKITYNKYHPYTSWIPITVYICLRNISQNVRSYSLTLFAWLGKITLETYISQFHIWLRSSVPDAQPKXXXXXXXXXXXXNFMLTTAIYITVSYRLFELTNTLKIAFVPGKDDKRLLHNLISAAIIFG 736
            ++EW FR  LDRY+   G+++A+ +  +++         E L   ++   +L  S +  L   +   W       +K   N+ HP  S + I  +I +RNI    RS   + FAW GKI+LE +I Q+HIWL      A  +            N +++T I++ V++ + ++T  L    +P KD+  L   L      FG
Sbjct:  593 VYEWWFRWRLDRYVVFHGVLFAFIYLALQRRQILSEGKGEPLFSNKISNFLLFVSVVSFLTYSI---WASSCK--NKAECNELHPSVSVVQIVAFILIRNIPGYARSIYSSFFAWFGKISLELFICQYHIWLA-----ADTRGILVLIPGNPTLNIIVSTFIFVCVAHEISQITTDLAQVVIP-KDNPSLFRRLACTIAFFG 783          
BLAST of FC925326 vs. ExPASy Swiss-Prot
Match: CAS1_CRYNV (Probable O-acetyltransferase CAS1 OS=Cryptococcus neoformans var. grubii GN=CAS1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.308e-16
Identity = 64/222 (28.83%), Postives = 100/222 (45.05%), Query Frame = 2
Query:   17 MAVKLSACFLVVILIWEVPGVFELIWRPFTFLVAYTDPAKPTLPVLHEWHFRSGLDRYIWIVGMIYAY-------YHPTVEKWMEKLEETEVKLRILIKSAIGLLALMVGFLWFEYIYKLDKITYNKYHPYTSWIPITVYICLRNISQNVRSYSLTLFAWLGKITLETYISQFHIWLRSSVPDAQPKXXXXXXXXXXXXNFMLTTAIYITVSYRLFELTNTL 661
            +  KL  C  +V L    P + E +++    +      AK       EW FR  LD +I   GM+ AY       Y  +   W   +         LI S +G    M+ + WFE ++  +K  YN+YH     +PI  +I LRN S  +RS +  +F ++G+ +LET+I QFH WL S   D +              N +++T  +I +SYR+   T  +
Sbjct:  609 LLAKLFTCAGLVTLFMHFPWLMEDVFKVLNTVFNIQWSAK-------EWSFRVTLDLFIVWAGMLCAYGFVKFKEYQISDRPWFPTMHTAT-----LIGSVLG----MIWYFWFE-LHLANKFVYNEYHAVVCIVPIISFIFLRNASPVLRSSTSKIFCFIGQCSLETFILQFHGWLAS---DTKAVLLAVPSTQWRPVNLVISTICFIWLSYRVSGATGEI 810          
BLAST of FC925326 vs. ExPASy Swiss-Prot
Match: CAS1_CRYNE (Probable O-acetyltransferase CAS1 OS=Cryptococcus neoformans GN=CAS1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.643e-16
Identity = 62/220 (28.18%), Postives = 101/220 (45.91%), Query Frame = 2
Query:   17 MAVKLSACFLVVILIWEVPGVFELIWRPFTFLVAYTDPAKPTLPVLHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWMEKLEETEVKLR-----ILIKSAIGLLALMVGFLWFEYIYKLDKITYNKYHPYTSWIPITVYICLRNISQNVRSYSLTLFAWLGKITLETYISQFHIWLRSSVPDAQPKXXXXXXXXXXXXNFMLTTAIYITVSYRLFELTNTL 661
            +  KL  C  +V L    P + E +++    +      AK       EW FR  LD +I  VGM+ AY          K  E ++  R     +   + +G +  M+ + WFE ++   K  YN+YH     +PI  ++ LRN S  +RS +  +F ++G+ +LET+I QFH WL S   D +              N +++T  +I +SYR+   T  +
Sbjct:  610 LLTKLFTCAGLVTLFMHFPWLMEDVFKVLNTVFNIQWSAK-------EWSFRVTLDLFIVWVGMLCAY-------GFVKFNEHQISDRPWFPVMRTATLVGSVLGMIWYFWFE-LHLASKFVYNEYHAVVCIVPIMSFVFLRNASPVLRSSTSKIFCFIGQCSLETFILQFHGWLAS---DTKAILLAVPSTQWRPVNLVISTICFIWLSYRVSGATGEI 811          
The following BLAST results are available for this feature:
BLAST of FC925326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CASD1_HUMAN7.873e-1829.85CAS1 domain-containing protein 1 OS=Homo sapiens G... [more]
CASD1_DANRE3.908e-1729.65CAS1 domain-containing protein 1 OS=Danio rerio GN... [more]
CASD1_MOUSE2.533e-1627.72CAS1 domain-containing protein 1 OS=Mus musculus G... [more]
CAS1_CRYNV3.308e-1628.83Probable O-acetyltransferase CAS1 OS=Cryptococcus ... [more]
CAS1_CRYNE5.643e-1628.18Probable O-acetyltransferase CAS1 OS=Cryptococcus ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YH16FM1 TF Citrus clementina cDNA clone KN0AAP8YH16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925326 ID=FC925326; Name=FC925326; organism=Citrus clementina; type=EST; length=744bp
CGAGATTGGATCAGTCATGGCTGTAAAATTGAGTGCCTGCTTCTTGGTGG
TTATTCTAATATGGGAAGTTCCCGGAGTGTTTGAATTGATTTGGCGCCCA
TTTACTTTCCTCGTTGCCTATACTGATCCAGCGAAGCCGACATTGCCTGT
CTTGCATGAGTGGCATTTCCGCTCAGGTCTTGATCGTTACATATGGATAG
TGGGGATGATATATGCCTATTACCATCCCACTGTTGAAAAATGGATGGAG
AAACTAGAGGAAACAGAAGTCAAGCTCCGAATATTAATAAAATCAGCTAT
CGGATTGCTGGCCCTAATGGTTGGATTTTTGTGGTTCGAGTACATATACA
AATTGGATAAAATTACTTACAACAAATACCATCCTTATACGTCGTGGATT
CCAATTACTGTCTACATTTGCTTGAGAAACATCTCTCAGAATGTCCGCAG
CTACAGTTTGACACTCTTTGCATGGCTTGGGAAGATAACATTGGAGACCT
ACATCTCGCAATTCCATATTTGGTTAAGATCCTCAGTTCCAGATGCACAA
CCAAAATTGTTGCTTTCACTGATCCCTGACTACCCATTGTTGAATTTTAT
GCTCACTACTGCTATTTACATTACTGTCTCTTACAGATTATTTGAGCTAA
CAAATACATTAAAAATAGCATTTGTGCCCGGCAAAGATGACAAACGCCTG
CTTCATAACTTGATTTCAGCAGCTATCATCTTTGGTGTTCTATA
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