FC925493

Overview
NameFC925493
Unique NameFC925493
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length586
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC925493 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.413e-12
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 2 
Query:   92 RKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYD 208
            RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYD
Sbjct:   61 RKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYD 98

HSP 2 Score: 27.335 bits (59), Expect = 1.413e-12
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3 
Query:  294 LYSGETRSKHH 326
            +YSGETRSKHH
Sbjct:  100 MYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of FC925493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN1.413e-1274.36Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP3YJ03FM1 TF Citrus clementina cDNA clone KN0AAP3YJ03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925493 ID=FC925493; Name=FC925493; organism=Citrus clementina; type=EST; length=586bp
GTCGTCGGGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGAGTCCAGGGG
CACCGTCGACGCCAGTGACGCCGACGACTCCGCTGTCGGCGCGTAAGGAC
AACGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGG
TATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCACTG
TTTATGACTGCAACCAAATAAAGGCTAAGAGGAAGGAGGAAAACGTGGCA
CTCTGTCTCATGGGCGCGTTGAAATAGATCTTGTCTTATTCAGCTTTACA
GTGGGGAGACTAGGAGCAAGCATCATCACTGAGTGGATGATACGCTCCAG
CGATGTAAATGAATGTGATGGGTCACCAACTCACCGGATGAGTTGCCTGC
AGTCTGTAGATAGTGTCGTTTCGTTTTGGATTTCGCAACGTGTCCTTGTC
GTTTTTGTTAATGCTATTTGTATTACGTGTCCTTCCTATCTAAAGTTTGG
TTTTAAATGCTGCTGACTAAAAAGTAAACCAAAGACTGTGTGATGTTTTA
TATCATATAATTGTTTGTGAACGTGAGGATTGCCTA
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