FC925553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1) HSP 1 Score: 360.918 bits (925), Expect = 4.988e-99 Identity = 197/264 (74.62%), Postives = 214/264 (81.06%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERARRLA++A L RLV+++K H S +PSRY+SSLS P+VCS N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPKSIR+DSMK+SKFDEGLTESQMI HMQ LAS NK++KSFIGMGYYNT VP VILRNIMENP WYTQYTPYQAEIAQGRLESLLNFQTM+ DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN Sbjct: 1 MERARRLANKAILGRLVSQTK-----HNPS---ISSPALCSPSRYVSSLS--PYVCSGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFPNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTMVTDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 243
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 1.040e-96 Identity = 197/264 (74.62%), Postives = 211/264 (79.92%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERARRLA L RLV+++K H S +PSRY+SSLS P+VCS N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPKSIR+DSMK+SKFDEGLTESQMI HMQ LAS NK++KSFIGMGYYNT VP VILRNIMENP WYTQYTPYQAEIAQGRLESLLNFQTMI DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN Sbjct: 1 MERARRLA---ILGRLVSQTK-----HNPS---ISSPALCSPSRYVSSLS--PYVCSGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFPNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 240
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 1.774e-96 Identity = 196/264 (74.24%), Postives = 211/264 (79.92%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERARRLA L RLV+++K H S +PSRY+SSLS P+VCS N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPK+IR+DSMK+SKFDEGLTESQMI HMQ LAS NK++KSFIGMGYYNT VP VILRNIMENP WYTQYTPYQAEIAQGRLESLLNFQTMI DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN Sbjct: 1 MERARRLA---MLGRLVSQTK-----HNPS---ISSSALCSPSRYVSSLS--PYVCSGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFSNLDSLIDATVPKAIRLDSMKYSKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 240
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 2.317e-96 Identity = 196/264 (74.24%), Postives = 210/264 (79.55%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSN-NSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERARRLA L RLV+++K H S +PSRY+SSLS P+VC N RSD N+NG+G SQ R ISVEALKPSDTF RRHNSATPE+Q KM+E VG NLDSLIDATVPKSIR+DSMK+SKFDEGLTESQMI HMQ LAS NK++KSFIGMGYYNT VP VILRNIMENP WYTQYTPYQAEIAQGRLESLLNFQTMI DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN Sbjct: 1 MERARRLA---MLGRLVSQTK-----HNPS---ISSPALCSPSRYVSSLS--PYVCGGTNVRSD---------RNLNGFG--SQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFSNLDSLIDATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRNIMENPGWYTQYTPYQAEIAQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 240
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1) HSP 1 Score: 350.517 bits (898), Expect = 6.741e-96 Identity = 190/270 (70.37%), Postives = 215/270 (79.63%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTP-------SRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERARRLA+RA LKRL++E+KQ +R+++ T P SRY+SS+S + + S+ D SR + G G SQ+R ISVEALKPSDTF RRHNSATP++Q KM+E VG D LDSL+DATVPKSIR+ MKF+KFD GLTE QMIEHM+ LAS NKV+KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEI+QGRLESLLNFQTMI DLTGLPMSNASLLDEGTAAAEAM+MCNNIQKGKKKTFIIASN Sbjct: 1 MERARRLANRATLKRLLSEAKQ----NRKTESTSTTTTTPLPFSLSGSSSRYVSSVSNS-ILRGRGSKPDNNVSRRVG--GFLGVGYPSQSRSISVEALKPSDTFPRRHNSATPDEQTKMAESVGFDTLDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASN 263
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 9.734e-95 Identity = 184/263 (69.96%), Postives = 205/263 (77.95%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERAR+LA+RA LKRLV++SKQ N S Y PSRY+SSLS F NN++S Q Q R ISVEALKPSDTF RRHNSATPE+Q KM+E G +LD+LIDATVP+SIR +SMK KFD GLTESQMIEHMQ LAS NKV+KS+IGMGYYNT+VPPVILRN++ENPAWYTQYTPYQAEI+QGRLESLLN+QTMI DLTGLPMSNASLLDEGTAAAEAMAMCNNI KGKKKTF+IASN Sbjct: 1 MERARKLANRAILKRLVSQSKQSRSNEIPSSSL------YRPSRYVSSLSPYTFQARNNAKSFNTQ----------------QARSISVEALKPSDTFPRRHNSATPEEQTKMAEFCGFQSLDALIDATVPQSIRSESMKLPKFDSGLTESQMIEHMQNLASKNKVFKSYIGMGYYNTYVPPVILRNLLENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFLIASN 241
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 1.271e-94 Identity = 186/264 (70.45%), Postives = 207/264 (78.41%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSK-FDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERARRLA R +KRLVNE+K+ HR + T TPSRY+SS+S + S S S H QTR ISV+ALKPSDTF RRHNSATP++QA+M+ G DNL++LID+TVPKSIR+DSMKFS FDEGLTESQMIEHM LAS NKV+KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEI+QGRLESLLN+QT+I DLTGLPMSNASLLDEGTAAAEAMAMCNNI KGKKKTF+IASN Sbjct: 1 MERARRLAYRGIVKRLVNETKR----HRNGESSLLPTTTVTPSRYVSSVSSFLHRRRDVSGSAFTTSGRNQH----------QTRSISVDALKPSDTFPRRHNSATPDEQAQMANYCGFDNLNTLIDSTVPKSIRLDSMKFSGIFDEGLTESQMIEHMSDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTVITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFVIASN 250
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2) HSP 1 Score: 343.584 bits (880), Expect = 8.240e-94 Identity = 182/263 (69.20%), Postives = 211/263 (80.23%), Query Frame = 3 Query: 54 MERARRLASRAFLKRLVNESKQLSRNHRESKXXXXXXXTYTPSRYLSSLSCAPFVCSNNSRSDLLQSRNMSHHNVNGYGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 MERARRLA R +KRLVN++K+ HR ++ + P+RY+SSLS PF+ + R+++H +G QTR ISV+A+KPSDTF RRHNSATP++Q M++ G D++DSLIDATVPKSIR+DSMKFSKFD GLTESQMI+HM LAS NKV+KSFIGMGYYNTHVP VILRNIMENPAWYTQYTPYQAEI+QGRLESLLNFQT+I DLTGLPMSNASLLDEGTAAAEAMAMCNNI KGKKKTF+IASN Sbjct: 1 MERARRLAYRGIVKRLVNDTKR----HRNAETPHLVP--HAPARYVSSLS--PFIST---------PRSVNH--TAAFGRHQQTRSISVDAVKPSDTFPRRHNSATPDEQTHMAKFCGFDHIDSLIDATVPKSIRLDSMKFSKFDAGLTESQMIQHMVDLASKNKVFKSFIGMGYYNTHVPTVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTVITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFVIASN 244
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_JANSC (Glycine dehydrogenase [decarboxylating] OS=Jannaschia sp. (strain CCS1) GN=gcvP PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.234e-48 Identity = 95/168 (56.55%), Postives = 120/168 (71.43%), Query Frame = 3 Query: 333 PSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFD-EGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 P+D RRH +P + A+M E VG D+LD+LID TVP SIR + D ++E+++++HM+ +A NK S IG GY+ TH PP I RN++ENPAWYT YTPYQ EIAQGRLE+LLNFQTM+ADLTGLP++NASLLDE TAAAEAM M K K +TF + Sbjct: 10 PTDFANRRHIGPSPAEMAEMLEFVGADSLDALIDDTVPASIR----QAGALDWAAMSEAELLDHMRAIADKNKPMVSMIGQGYFGTHTPPAIQRNVLENPAWYTAYTPYQPEIAQGRLEALLNFQTMVADLTGLPVANASLLDEATAAAEAMVMAQRASKSKARTFFV 173
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_VIBHB (Glycine dehydrogenase [decarboxylating] OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.398e-46 Identity = 90/175 (51.43%), Postives = 116/175 (66.29%), Query Frame = 3 Query: 318 VEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +++L + F RHN DQ KM E + +LDSLID TVP IR++ E +E+ M+ M+K A N++ ++FIG GYYNT P VILRN+MENP WYT YTPYQ EI+QGRLESLLN+Q M+ DLTG+ ++NASLLDE TAAAEAM +C K K F +A + Sbjct: 5 LQSLSTQNEFVARHNGPNKSDQQKMLEAINAVSLDSLIDETVPAQIRLEQPM--NLAEAKSEADMLAAMRKFADQNQIKRTFIGQGYYNTFTPNVILRNVMENPGWYTAYTPYQPEISQGRLESLLNYQQMVMDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADD 177 The following BLAST results are available for this feature:
BLAST of FC925553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925553 ID=FC925553; Name=FC925553; organism=Citrus clementina; type=EST; length=842bpback to top |