FC925760

Overview
NameFC925760
Unique NameFC925760
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1449 contig Ccv1_Contig1449:1..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925760 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 4.464e-53
Identity = 97/114 (85.09%), Postives = 105/114 (92.11%), Query Frame = 2
Query:    2 PALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQEFSRAITILSENNPPHGTKGEIRKVCNLANKLH 343
            P+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILD+KGL++VDHQLA DKRTRP VKKMAK Q YFF+EF+RAI ILSENNP  G+KGEIRK CNLANK H
Sbjct:  217 PSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of FC925760 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.018e-29
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 2
Query:    2 PALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQEFSRAITILSENNPPHGTKGEIRKVCNLAN 334
            P L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+  KGL+++D +LATD RT P+V KMA   +YF ++FSR + +LSE NP  G +GEIRK C   N
Sbjct:  217 PTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of FC925760 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 2
Query:   11 NPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQEFSRAITILSENNPPHGTKGEIRKVCNLAN 334
            NP     +   C +   DP    +  ND  TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FF++F++A+  LS      G +GEIR+ C+  N
Sbjct:  211 NPRFAVALKKACANYPKDPTISVF--NDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of FC925760 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.897e-11
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 2
Query:   11 NPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQEFSRAITILSENNPPHGTKGEIRKVCNLAN 334
            NP     +   C ++  DP    +  ND  TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +    G +GEIR+ C+  N
Sbjct:  223 NPRFAVALKKACSNSKNDPTISVF--NDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of FC925760 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 2
Query:    8 LNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQEFSRAITILSENNPPHGTKGEIRKVCNLAN 334
            +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE N   G  GE+R+ C+  N
Sbjct:  216 MNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
BLAST of FC925760 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 38/110 (34.55%), Postives = 55/110 (50.00%), Query Frame = 2
Query:    5 ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFQEFSRAITILSENNPPHGTKGEIRKVCNLAN 334
            +L+  +   +++KC  +      V    ND  T  V DN YYRN+   KGL   D  L  D RTR  V+++A  ++ FFQ +S +   LS      G  GEIR+ C+  N
Sbjct:  220 SLDNSYAETLMNKCSSSESSSLTVS---NDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
The following BLAST results are available for this feature:
BLAST of FC925760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PER42_ARATH4.464e-5385.09Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH2.018e-2952.25Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER31_ARATH1.112e-1137.96Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER63_ARATH1.897e-1137.04Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER6_ARATH4.227e-1133.94Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER46_ARATH9.416e-1134.55Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP11YK06FM1 TF Citrus clementina cDNA clone KN0AAP11YK06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925760 ID=FC925760; Name=FC925760; organism=Citrus clementina; type=EST; length=643bp
CCCTGCACTGAACCCTGACCACGTTCCGCATATGCTCCATAAGTGTCCTG
ATGCCATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGC
ACACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAGCAA
GGGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGAC
CTTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCCAGGAATTT
TCAAGAGCCATTACTATCCTTTCTGAGAACAACCCTCCTCACGGTACAAA
GGGTGAGATCAGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGT
CCTAGCTAGCTAACAGCTGTATCTGCTGCAACAAGTTAATAGCTCCAAAT
TTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTC
CCAATAAGATGGTTTTTCTAGATGGGTTTGTTTCCTGTAAGATGTTCGTG
TTACTACTACTATGTTCCTTAGATGTACTGTCTAATGTTTAAGCCCAGGC
CTTCCTTGTCCTCGATGGTGTGAGCATGATGTTATTAGTATTTAGTAATG
GCAATGTAAATGTGGGATGTATGTAAAAAAAAAAAAAAAAAAA
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